RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 FBXO48Q5FWF7 155 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF311Q5JNZ3 666 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PCID2Q5JVF3 399 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 EPHA10Q5JZY3 1008 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 IL23RQ5VWK5 629 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 WSCD1Q658N2 575 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 KDM7AQ6ZMT4 941 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 Q6ZPB1 254 aaPredicted RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 TOM1L2Q6ZVM7 507 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM126BQ8IUX1 230 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 MAP7D3Q8IWC1 876 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CSGALNACT2Q8N6G5 542 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SEMA6DQ8NFY4 1073 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 AGAP11Q8TF27 550 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 MRPL53Q96EL3 112 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 LINGO1Q96FE5 620 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 BPIFA3Q9BQP9 254 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SIKE1Q9BRV8 207 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SF3B5Q9BWJ5 86 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF416Q9BWM5 594 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PUS3Q9BZE2 481 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FAM192AQ9GZU8 254 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SLC2A4RGQ9NR83 387 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SDR39U1Q9NRG7 319 aaPredicted RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 THSD1Q9NS62 852 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.64□□□□□ -1.993e-7■■■□□ 15.3
UBXN4-208ENST00000490163 RMND1Q9NWS8 449 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 MIOXQ9UGB7 285 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 USH1CQ9Y6N9 552 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 GMNCA6NCL1 334 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ANKRD61A6NGH8 418 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 MSGN1A6NI15 193 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SHISA7A6NL88 538 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SPECC1L-ADORA2AF8WAN1 911 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 OR4F21O95013 312 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 S100A1P23297 94 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 LMO1P25800 156 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 GNL1P36915 607 aaPredicted RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 NAMPTP43490 491 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PPP3CCP48454 512 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CCT3P49368 545 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DUSP3P51452 185 aaPredicted RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CDH4P55283 916 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 RPS13P62277 151 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FOLH1Q04609 750 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PPP1R3AQ16821 1122 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 KCTD16Q68DU8 428 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 OR7E24Q6IFN5 339 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FAM173BQ6P4H8 233 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SLC35F6Q8N357 371 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 RNF10Q8N5U6 811 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 NOA1Q8NC60 698 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC197Q8NCU1 140 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 OR9A1PQ8NGU1 263 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ST7LQ8TDW4 575 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DLX4Q92988 240 aaPredicted RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PIGTQ969N2 578 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SLC35B4Q969S0 331 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ZG16BQ96DA0 208 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 C12orf66Q96MD2 445 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 AMDHD1Q96NU7 426 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 RBM4BQ9BQ04 359 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 BDH2Q9BUT1 245 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PINK1Q9BXM7 581 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 AAMDCQ9H7C9 122 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FARSBQ9NSD9 589 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FAM120CQ9NX05 1096 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FLRT3Q9NZU0 649 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ADAMTSL1Q8N6G6 1762 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PPIAL4CA0A0B4J2A2 164 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 OR5K3A6NET4 321 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DCXO43602 365 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CHST1O43916 411 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SNX3O60493 162 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 EML2O95834 649 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 UQCRFS1P1P0C7P4 283 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 FRMD6-AS1P0C7T7 363 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ZCCHC18P0CG32 403 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PPIAL4GP0DN37 164 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 HSPA8P11142 646 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 EPB41P11171 864 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 TBXA2RP21731 343 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 PRKACBP22694 351 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DNASE1P24855 282 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 RBMS1P29558 406 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 KIF5AQ12840 1032 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DPYSL3Q14195 570 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 MCMDC2Q4G0Z9 681 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 KLC3Q6P597 504 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 C6orf89Q6UWU4 347 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 ISLR2Q6UXK2 745 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SLC25A48Q6ZT89 311 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 TMPRSS11FQ6ZWK6 438 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CCDC190Q86UF4 302 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 TRIM69Q86WT6 500 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 VSTM4Q8IW00 320 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 DCP1BQ8IZD4 617 aaKnown RBP2.64□□□□□ -1.99
UBXN4-208ENST00000490163 TTC5Q8N0Z6 440 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 CLIP4Q8N3C7 705 aa2.64□□□□□ -1.99
UBXN4-208ENST00000490163 SLC5A8Q8N695 610 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms