RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PRM3Q9NNZ6 103 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 LYARQ9NX58 379 aaKnown RBP9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 NDE1Q9NXR1 346 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 ATP6V1HQ9UI12 483 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 CES1P1Q9UKY3 287 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 USP9XQ93008 2570 aaPredicted RBP9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 A0A1W2PS29 197 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 ARHGAP10A1A4S6 786 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 GABRR3A8MPY1 467 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 TGFBR3LH3BV60 316 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 AKAP10O43572 662 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 MGRN1O60291 552 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 SCN2BO60939 215 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 MYO1DO94832 1006 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 LRATO95237 230 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 CD46P15529 392 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 CD96P40200 585 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 GSTM5P46439 218 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 ASMTP46597 345 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 WNT3P56703 355 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 TNFRSF17Q02223 184 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 OC90Q02509 493 aaPredicted RBP9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 DUSP2Q05923 314 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 OR1C1Q15619 314 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 SPRED3Q2MJR0 410 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 NDUFAF5Q5TEU4 345 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 ANKRD26P1Q6NSI1 321 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 IKBIPQ70UQ0 350 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 GPR180Q86V85 440 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 KIF2BQ8N4N8 673 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 FAM47BQ8NA70 645 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 TMEM178AQ8NBL3 297 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 MDS2Q8NDY4 140 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 C7orf57Q8NEG2 295 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 NFAM1Q8NET5 270 aaPredicted RBP9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 B3GNT7Q8NFL0 401 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 OR7A2PQ8NGA2 310 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 GFM2Q969S9 779 aaKnown RBP9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 MCUR1Q96AQ8 359 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 TESCQ96BS2 214 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 COQ8BQ96D53 544 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 NPAS2Q99743 824 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 DEFB126Q9BYW3 111 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 CDCP1Q9H5V8 836 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 ADAP2Q9NPF8 381 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 ARL8BQ9NVJ2 186 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 TMEM45AQ9NWC5 275 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 ERRFI1Q9UJM3 462 aaPredicted RBP9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 FBXW2Q9UKT8 454 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 PPIEQ9UNP9 301 aaKnown RBP9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 ERVK-11Q9UQG0 969 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 PCDHA9Q9Y5H5 950 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 SPACA6W5XKT8 324 aa9.82□□□□□ -0.84
SCAMP4-208ENST00000489554 CPAMD8Q8IZJ3 1885 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 FAM234BA2RU67 622 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 WIPF3A6NGB9 483 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 A8MUA0 341 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 FBP2O00757 339 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 PGRMC2O15173 223 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 MAN1A2O60476 641 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 CTNSO60931 367 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC22A3O75751 556 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 LAMP1P11279 417 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 PCSK2P16519 638 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 HOXB9P17482 250 aaPredicted RBP9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 DDCP20711 480 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 PRPS1L1P21108 318 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SOX18P35713 384 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 FRKP42685 505 aaPredicted RBP9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 CLCN2P51788 898 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 TDGF1P3P51864 188 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 DGKQP52824 942 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 PER3P56645 1201 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 MLF1P58340 268 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 ELF3P78545 371 aaPredicted RBP9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 C2orf80Q0P641 193 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 MAPRE2Q15555 327 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 ELAVL1Q15717 326 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SNCBQ16143 134 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 C4orf17Q53FE4 359 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 AGKQ53H12 422 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SPANXN4Q5MJ08 99 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC48A1Q6P1K1 146 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 RETREG3Q86VR2 466 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 ARMC10Q8N2F6 343 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 TMEM132CQ8N3T6 1108 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 FAM98AQ8NCA5 519 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 APCDD1LQ8NCL9 501 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 VMP1Q96GC9 406 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SCMH1Q96GD3 660 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SIGLEC12Q96PQ1 595 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 DPY30Q9C005 99 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 REEP4Q9H6H4 257 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 PNO1Q9NRX1 252 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 TAS2R7Q9NYW3 318 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 CCDC167Q9P0B6 97 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 OSGIN2Q9Y236 505 aa9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 WBP11Q9Y2W2 641 aaKnown RBP9.81□□□□□ -0.84
SCAMP4-208ENST00000489554 SCN2AQ99250 2005 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms