RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ZNF700Q9H0M5 742 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 RMND5AQ9H871 391 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 TAS2R9Q9NYW1 312 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 TAGLN3Q9UI15 199 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ZNF639Q9UID6 485 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 DOPEY2Q9Y3R5 2298 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 A0A096LPI6 279 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 IGHV1-45A0A0A0MS14 117 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 PLOD2O00469 737 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 RFXANKO14593 260 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 MRASO14807 208 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 AIM2O14862 343 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 NME6O75414 186 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-229ENST00000486665 CLPSP04118 112 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 COX6A1P12074 109 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 HOXB9P17482 250 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-229ENST00000486665 MC3RP41968 323 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 TRPC1P48995 793 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 GPR143P51810 404 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 EXOSC7Q15024 291 aaKnown RBP11.9□□□□□ -0.5
HDAC6-229ENST00000486665 SPRED3Q2MJR0 410 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 MMEL1Q495T6 779 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 PAPD4Q6PIY7 484 aaKnown RBP11.9□□□□□ -0.5
HDAC6-229ENST00000486665 DNAJC14Q6Y2X3 702 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-229ENST00000486665 ZNF621Q6ZSS3 439 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 GALNT12Q8IXK2 581 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 MSRB3Q8IXL7 192 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 DPP10Q8N608 796 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 C7orf57Q8NEG2 295 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 ZNF675Q8TD23 568 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 PCSK5Q92824 1860 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 CTHRC1Q96CG8 243 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 SENP5Q96HI0 755 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-229ENST00000486665 IMMP1LQ96LU5 166 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 PANX1Q96RD7 426 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 EFHD1Q9BUP0 239 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 NUDT9Q9BW91 350 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 IL1RL2Q9HB29 575 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 C19orf25Q9UFG5 118 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-229ENST00000486665 PCDHGB4Q9UN71 923 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 ERVK-19Q9WJR5 959 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 PCDHB14Q9Y5E9 798 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 SNX8Q9Y5X2 465 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 CLCA3PQ9Y6N3 262 aa11.9□□□□□ -0.5
HDAC6-229ENST00000486665 TRBV5-3A0A0A0MS03 114 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 A0A1W2PQ72 361 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 SAGE2PA6NJ88 616 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 BBIP1A8MTZ0 92 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 UPK1AO00322 258 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 PCDH17O14917 1159 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 SUV39H1O43463 412 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 PLOD3O60568 738 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 ERN1O75460 977 aaKnown RBP11.89□□□□□ -0.51
HDAC6-229ENST00000486665 CBX7O95931 251 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 ITGB2P05107 769 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 ESRRAP11474 423 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-229ENST00000486665 SSTR4P31391 388 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 CCT3P49368 545 aaKnown RBP11.89□□□□□ -0.51
HDAC6-229ENST00000486665 LRRC74AQ0VAA2 488 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 FUT7Q11130 342 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 GAB1Q13480 694 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 COQ5Q5HYK3 327 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 LRIF1Q5T3J3 769 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 NDUFAF7Q7L592 441 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 MRGPREQ86SM8 312 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 VWA5B2Q8N398 1253 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 ZNF615Q8N8J6 731 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 OR5AK3PQ8NH89 298 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 OR14A16Q8NHC5 309 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 FBXO27Q8NI29 283 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 SLC2A12Q8TD20 617 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 ZNF721Q8TF20 911 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 DAZLQ92904 295 aaKnown RBP11.89□□□□□ -0.51
HDAC6-229ENST00000486665 FAM120BQ96EK7 910 aaKnown RBP11.89□□□□□ -0.51
HDAC6-229ENST00000486665 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 LPAR4Q99677 370 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 CNPPD1Q9BV87 410 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 OR8D2Q9GZM6 311 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 EPS8L2Q9H6S3 715 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 EFCAB1Q9HAE3 211 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 P4HTMQ9NXG6 502 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 SLC25A37Q9NYZ2 338 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 VAPAQ9P0L0 249 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 NTMQ9P121 344 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 FBXL4Q9UKA2 621 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 HEMK1Q9Y5R4 338 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-229ENST00000486665 CROCCQ5TZA2 2017 aa11.89□□□□□ -0.51
HDAC6-229ENST00000486665 UTP20O75691 2785 aaKnown RBP11.89□□□□□ -0.51
HDAC6-229ENST00000486665 A0A087WV62 115 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 CDC14CA4D256 554 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 SYNDIG1LA6NDD5 238 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 EMC8O43402 210 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 KCNH1O95259 989 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 IGKV3-11P04433 115 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 CELA2AP08217 269 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 ZCCHC18P0CG32 403 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 UQCRC2P22695 453 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 SOAT1P35610 550 aa11.88□□□□□ -0.51
HDAC6-229ENST00000486665 PRKAG1P54619 331 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms