RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MYO1DO94832 1006 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 PSMG1O95456 288 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 KLK1P06870 262 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 BPGMP07738 259 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 NR2F6P10588 404 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 UROSP10746 265 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 CPMP14384 443 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 DRD2P14416 443 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ALOX15P16050 662 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 NME2P22392 152 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 CPN2P22792 545 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 VAMP1P23763 118 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SERPINB3P29508 390 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 TLX1P31314 330 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 DEKP35659 375 aaKnown RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 BUD31P41223 144 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 MAP3K8P41279 467 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 FRKP42685 505 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 CLCN2P51788 898 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 HK2P52789 917 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 RNF4P78317 190 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 PHEXP78562 749 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ACTN3Q08043 901 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 SLC13A2Q13183 592 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 HYAL4Q2M3T9 481 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 PRICKLE4Q2TBC4 344 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ZNF791Q3KP31 576 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 ZNF385BQ569K4 471 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SPIN4Q56A73 249 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 PIGGQ5H8A4 983 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ARL13AQ5H913 290 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 EXOSC6Q5RKV6 272 aaKnown RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 FHL5Q5TD97 284 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ABHD17BQ5VST6 288 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 AP1ARQ63HQ0 302 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 KANK2Q63ZY3 851 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 CLEC6AQ6EIG7 209 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 OR52E8Q6IFG1 317 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 FAM71E1Q6IPT2 247 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 TMEM81Q6P7N7 255 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SHISA2Q6UWI4 295 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 LINC00696Q6ZRV3 163 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 PAGE2Q7Z2X7 111 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 MAVSQ7Z434 540 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 CROCCP2Q86T23 111 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SRRM1Q8IYB3 904 aaKnown RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 SLC5A8Q8N695 610 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SLC15A4Q8N697 577 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 C1orf52Q8N6N3 182 aaKnown RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 ZFP62Q8NB50 900 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 ST6GALNAC3Q8NDV1 305 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SUN3Q8TAQ9 357 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SLC2A12Q8TD20 617 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 GRHL3Q8TE85 626 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 RNF138Q8WVD3 245 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 CCT6BQ92526 530 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 NCLNQ969V3 563 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ATP6V1E2Q96A05 226 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ADIPOR1Q96A54 375 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 TP53INP1Q96A56 240 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 TLCD1Q96CP7 247 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ERP27Q96DN0 273 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 MTFMTQ96DP5 389 aaKnown RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 CNRIP1Q96F85 164 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 C3orf30Q96M34 536 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 FAM111AQ96PZ2 611 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 RASL10BQ96S79 203 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 SORT1Q99523 831 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 PELOQ9BRX2 385 aaKnown RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 ELOVL6Q9H5J4 265 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 CDCP1Q9H5V8 836 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 KCNK13Q9HB14 408 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 PROK2Q9HC23 129 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 MID1IP1Q9NPA3 183 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 NMRK1Q9NWW6 199 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ANKRD10Q9NXR5 420 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 NTMQ9P121 344 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ABI3Q9P2A4 366 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 MID2Q9UJV3 735 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 FBXW2Q9UKT8 454 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ERVK-11Q9UQG0 969 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 DLGAP4Q9Y2H0 992 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 ZNF835Q9Y2P0 537 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 YARS2Q9Y2Z4 477 aaKnown RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 HEMK1Q9Y5R4 338 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 SPACA6W5XKT8 324 aa5.29□□□□□ -1.56
CUX1-208ENST00000485792 HRNRQ86YZ3 2850 aaPredicted RBP5.29□□□□□ -1.56
CUX1-208ENST00000485792 PRR14LQ5THK1 2151 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 PDZD2O15018 2839 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 TLDC2A0PJX2 215 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 DYTNA2CJ06 578 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 OR6C76A6NM76 312 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 GABRR3A8MPY1 467 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 MYO1GB0I1T2 1018 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 AZIN1O14977 448 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 LSM1O15116 133 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 PLOD3O60568 738 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 GUCY1B2O75343 617 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 ITGA10O75578 1167 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 RSL1D1O76021 490 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms