RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PM20D2Q8IYS1 436 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 METTL4Q8N3J2 472 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 OR7G1Q8NGA0 311 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 ANP32BQ92688 251 aaKnown RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 NTNG2Q96CW9 530 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 WDYHV1Q96HA8 205 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 TMEM41AQ96HV5 264 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 LRRC1Q9BTT6 524 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 BRINP2Q9C0B6 783 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 ACSS3Q9H6R3 686 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 FARSBQ9NSD9 589 aaKnown RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 AHSPQ9NZD4 102 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 XPR1Q9UBH6 696 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 CES1P1Q9UKY3 287 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 PLEKHA6Q9Y2H5 1048 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 PCDHA9Q9Y5H5 950 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 KIAA1549Q9HCM3 1950 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 STX16-NPEPL1H3BU86 382 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 STX16O14662 325 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 KRT15P19012 456 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 PTPN6P29350 595 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 PHBP35232 272 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 FEN1P39748 380 aaKnown RBP17.57■□□□□ 0.4
COL27A1-205ENST00000485397 PEX19P40855 299 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 MAGEA12P43365 314 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 MAPK12P53778 367 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 RPP38P78345 283 aaKnown RBP17.57■□□□□ 0.4
COL27A1-205ENST00000485397 IFT88Q13099 833 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 CEBPEQ15744 281 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 PRICKLE4Q2TBC4 344 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 FBXL19-AS1Q494R0 122 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 NHSL2Q5HYW2 709 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 NSUN5P2Q63ZY6 315 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 TIGD3Q6B0B8 471 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 PAGE2Q7Z2X7 111 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 MILR1Q7Z6M3 343 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 YRDCQ86U90 279 aaKnown RBP17.57■□□□□ 0.4
COL27A1-205ENST00000485397 CDC20BQ86Y33 519 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 SIMC1Q8NDZ2 872 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 C17orf47Q8NEP4 570 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 OR4F6Q8NGB9 312 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 FAM222BQ8WU58 562 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 TRIB1Q96RU8 372 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 ITPAQ9BY32 194 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 ZNF629Q9UEG4 869 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-205ENST00000485397 MTRF1LQ9UGC7 380 aaKnown RBP17.57■□□□□ 0.4
COL27A1-205ENST00000485397 BCAP29Q9UHQ4 241 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 CBLCQ9ULV8 474 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 SLC12A4Q9UP95 1085 aa17.57■□□□□ 0.4
COL27A1-205ENST00000485397 C2orf72A6NCS6 295 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 A6NNC1 897 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 PPP6CO00743 305 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ERAL1O75616 437 aaKnown RBP17.56■□□□□ 0.4
COL27A1-205ENST00000485397 PPM1BO75688 479 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 SOX18P35713 384 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 DUSP2Q05923 314 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 EXOSC7Q15024 291 aaKnown RBP17.56■□□□□ 0.4
COL27A1-205ENST00000485397 C8orf74Q6P047 294 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 SLC48A1Q6P1K1 146 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ANGPTL8Q6UXH0 198 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 COMMD6Q7Z4G1 85 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 TGIF2LYQ8IUE0 185 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 VWA5B2Q8N398 1253 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ADCY4Q8NFM4 1077 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 SLC44A1Q8WWI5 657 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 HGDQ93099 445 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ABTB1Q969K4 478 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ISL2Q96A47 359 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 TM4SF18Q96CE8 201 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 HSPBAP1Q96EW2 488 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 LRRC46Q96FV0 321 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 RMND5BQ96G75 393 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-205ENST00000485397 NODALQ96S42 347 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ELOVL6Q9H5J4 265 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 METTL7AQ9H8H3 244 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 MAT2BQ9NZL9 334 aa17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ANKHD1Q8IWZ3 2542 aaKnown RBP17.56■□□□□ 0.4
COL27A1-205ENST00000485397 ITPR3Q14573 2671 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 MED12Q93074 2177 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 C1orf226A1L170 272 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 CD8B2A6NJW9 211 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 SMIM24O75264 130 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 PDYNP01213 254 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 TSPAN8P19075 237 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 TACR1P25103 407 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 DEKP35659 375 aaKnown RBP17.55■□□□□ 0.4
COL27A1-205ENST00000485397 PTGDSP41222 190 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 NAGLUP54802 743 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 CDH13P55290 713 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 GALNT1Q10472 559 aaPredicted RBP17.55■□□□□ 0.4
COL27A1-205ENST00000485397 MAP4K2Q12851 820 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 SF3B4Q15427 424 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL27A1-205ENST00000485397 GGTA1PQ4G0N0 100 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 C10orf62Q5T681 223 aaPredicted RBP17.55■□□□□ 0.4
COL27A1-205ENST00000485397 FAM180BQ6P0A1 224 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 FAM83FQ8NEG4 500 aaPredicted RBP17.55■□□□□ 0.4
COL27A1-205ENST00000485397 OR1J4Q8NGS1 313 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 GOT1L1Q8NHS2 421 aaPredicted RBP17.55■□□□□ 0.4
COL27A1-205ENST00000485397 TRPC4APQ8TEL6 797 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 OMA1Q96E52 524 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms