RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 PORCNQ9H237 461 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ZDHHC6Q9H6R6 413 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 MAN2C1Q9NTJ4 1040 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 POMT2Q9UKY4 750 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 SH3GLB1Q9Y371 365 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ETV7Q9Y603 341 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 TEX264Q9Y6I9 313 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 KIAA1217Q5T5P2 1943 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 ATAD5Q96QE3 1844 aa3.16□□□□□ -1.9
GTF3A-207ENST00000482655 CHD7Q9P2D1 2997 aa3.15□□□□□ -1.9
GTF3A-207ENST00000482655 A0A087WZ39 114 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 IQCMA0A1B0GVH7 501 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 MTMR11A4FU01 709 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 EPOPA6NHQ4 379 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 ZNF732B4DXR9 585 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 TLR4O00206 839 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CXCL11O14625 94 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 OGTO15294 1046 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SAP30O75446 220 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 ZFAND5O76080 213 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CHRNGP07510 517 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SKILP12757 684 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 GIFP27352 417 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SFNP31947 248 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 TSFMP43897 325 aaKnown RBP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 OR3A2P47893 321 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 HNRNPFP52597 415 aaKnown RBP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 PAX9P55771 341 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 BPIFB3P59826 476 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SRP54P61011 504 aaKnown RBP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SSTP61278 116 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CCZ1BP86790 482 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CCZ1P86791 482 aaPredicted RBP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 IL1RL1Q01638 556 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 GUCY2DQ02846 1103 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 TCP10Q12799 353 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CNTN1Q12860 1018 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SRSF9Q13242 221 aaKnown RBP eCLIP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 GAMTQ14353 236 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 EFTUD2Q15029 972 aaKnown RBP eCLIP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CARTPTQ16568 116 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 STX1AQ16623 288 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CDC42EP5Q6NZY7 148 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 TMEM64Q6YI46 380 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CYP4V2Q6ZWL3 525 aaPredicted RBP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 ADCK1Q86TW2 530 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 HOGA1Q86XE5 327 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 LACC1Q8IV20 430 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SPAG16Q8N0X2 631 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 KDM8Q8N371 416 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 OR4A16Q8NH70 328 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 KIAA1524Q8TCG1 905 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SMAP2Q8WU79 429 aaPredicted RBP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 GATAD1Q8WUU5 269 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 DTD2Q96FN9 168 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 FAM111AQ96PZ2 611 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CLEC7AQ9BXN2 247 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 KRT23Q9C075 422 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 ATP13A3Q9H7F0 1226 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 UBE2TQ9NPD8 197 aaPredicted RBP3.15□□□□□ -1.91
GTF3A-207ENST00000482655 SLC7A10Q9NS82 523 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 HOMER3Q9NSC5 361 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 ACOXLQ9NUZ1 547 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 PLEK2Q9NYT0 353 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 ZNF319Q9P2F9 582 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 THEGQ9P2T0 379 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 KCNN3Q9UGI6 736 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 PLCL2Q9UPR0 1127 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 ZHX2Q9Y6X8 837 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 CHD9Q3L8U1 2897 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 PLXNA3P51805 1871 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 PTPRSQ13332 1948 aa3.15□□□□□ -1.91
GTF3A-207ENST00000482655 DCHS1Q96JQ0 3298 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 A0A0G2JMZ2 1700 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 hCG_38984A0A1B0GV85 526 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 MACROD2A1Z1Q3 448 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 CFAP73A6NFT4 308 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 MSGN1A6NI15 193 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.14□□□□□ -1.91
GTF3A-207ENST00000482655 EEF2KO00418 725 aaKnown RBP3.14□□□□□ -1.91
GTF3A-207ENST00000482655 RASGRF2O14827 1237 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 SURF4O15260 269 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 NXPH2O95156 264 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 OR6A2O95222 327 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 MT-ATP6P00846 226 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 HOXB7P09629 217 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 NUDT17P0C025 328 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 MYOGP15173 224 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 CYP3A5P20815 502 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 ACKR3P25106 362 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 HLA-FP30511 346 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 ALDH3B1P43353 468 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 ASMTP46597 345 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 TNFSF10P50591 281 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 CNN1P51911 297 aaKnown RBP3.14□□□□□ -1.91
GTF3A-207ENST00000482655 GEMP55040 296 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 OR1D5P58170 312 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 GMFBP60983 142 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 GABPAQ06546 454 aa3.14□□□□□ -1.91
GTF3A-207ENST00000482655 GCKRQ14397 625 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms