RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CASC3O15234 703 aaKnown RBP13.62□□□□□ -0.23
CHD3-211ENST00000481999 TNFP01375 233 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 OR12D1P0DN82 309 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 ANXA8P13928 327 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 CD36P16671 472 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
CHD3-211ENST00000481999 MAZP56270 477 aaKnown RBP13.62□□□□□ -0.23
CHD3-211ENST00000481999 NCS1P62166 190 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 YPEL5P62699 121 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 ABATP80404 500 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 SYPL1Q16563 259 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 MLIPQ5VWP3 458 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 SAXO2Q658L1 398 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 MFSD4AQ8N468 514 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 MFSD9Q8NBP5 474 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 MINDY2Q8NBR6 621 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 GPBAR1Q8TDU6 330 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 TMEM19Q96HH6 336 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 OR2A5Q96R48 311 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 FEVQ99581 238 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 COPS4Q9BT78 406 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 LRRC61Q9BV99 259 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 ITPAQ9BY32 194 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 QRSL1Q9H0R6 528 aaKnown RBP13.62□□□□□ -0.23
CHD3-211ENST00000481999 MIR1-1HGQ9H1L0 117 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 ANKHQ9HCJ1 492 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 HRASLS2Q9NWW9 162 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 KCNE3Q9Y6H6 103 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 CELSR3Q9NYQ7 3312 aa13.62□□□□□ -0.23
CHD3-211ENST00000481999 A0A1W2PPC4 97 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 FAM170BA6NMN3 283 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 SDC3O75056 442 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 LCKP06239 509 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 TGFBR2P37173 567 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 RBM45Q8IUH3 476 aaKnown RBP13.61□□□□□ -0.23
CHD3-211ENST00000481999 OR10G2Q8NGC3 310 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 OR9A2Q8NGT5 310 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 XAGE5Q8WWM1 108 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 OR5P2Q8WZ92 322 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 MYDGFQ969H8 173 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 SLC38A4Q969I6 547 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 NEURL3Q96EH8 262 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 ZBED6CLQ96FA7 236 aaPredicted RBP13.61□□□□□ -0.23
CHD3-211ENST00000481999 C16orf58Q96GQ5 468 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 SLC2A4RGQ9NR83 387 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 ZCCHC3Q9NUD5 404 aaKnown RBP13.61□□□□□ -0.23
CHD3-211ENST00000481999 HS3ST3A1Q9Y663 406 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 PMF1-BGLAPU3KQ54 211 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 SEMA7AO75326 666 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 ARAFP10398 606 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 CTSEP14091 401 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 GLULP15104 373 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 ITGA2P17301 1181 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 AHRP35869 848 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 FRKP42685 505 aaPredicted RBP13.61□□□□□ -0.23
CHD3-211ENST00000481999 LASP1Q14847 261 aaKnown RBP13.61□□□□□ -0.23
CHD3-211ENST00000481999 MRM1Q6IN84 353 aaKnown RBP13.61□□□□□ -0.23
CHD3-211ENST00000481999 SIX5Q8N196 739 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 SLC5A8Q8N695 610 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 TTLQ8NG68 377 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 OR5T3Q8NGG3 340 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 KAT2AQ92830 837 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 COL26A1Q96A83 441 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 QRFPRQ96P65 431 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 PITHD1Q9GZP4 211 aaPredicted RBP13.61□□□□□ -0.23
CHD3-211ENST00000481999 PSORS1C1Q9UIG5 152 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 SNX7Q9UNH6 387 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 POFUT2Q9Y2G5 429 aa13.61□□□□□ -0.23
CHD3-211ENST00000481999 ZSCAN9O15535 394 aaPredicted RBP13.6□□□□□ -0.23
CHD3-211ENST00000481999 POU2F1P14859 743 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 PCBP3P57721 371 aaKnown RBP13.6□□□□□ -0.23
CHD3-211ENST00000481999 SIM1P81133 766 aaPredicted RBP13.6□□□□□ -0.23
CHD3-211ENST00000481999 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHD3-211ENST00000481999 TBCEQ15813 527 aaPredicted RBP13.6□□□□□ -0.23
CHD3-211ENST00000481999 INAQ16352 499 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 FIGLAQ6QHK4 219 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 ASPGQ86U10 573 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 OR4C15Q8NGM1 316 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 RHOXF1Q8NHV9 184 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 UTP15Q8TED0 518 aaKnown RBP13.6□□□□□ -0.23
CHD3-211ENST00000481999 KLHL6Q8WZ60 621 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 RPL3LQ92901 407 aaKnown RBP13.6□□□□□ -0.23
CHD3-211ENST00000481999 ZHX1-C8orf76Q96EF9 292 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 BBS4Q96RK4 519 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 TMEM38AQ9H6F2 299 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 FAM60AQ9NP50 221 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 THSD1Q9NS62 852 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 GIN1Q9NXP7 522 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 TRPC4Q9UBN4 977 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 EFCAB9A8MZ26 197 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 PROM1O43490 865 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 IFNA14P01570 189 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 IGLV3-19P01714 112 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 BMP4P12644 408 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 NDUFS1P28331 727 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 SERPINB1P30740 379 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 MC3RP41968 323 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 CDH12P55289 794 aa13.6□□□□□ -0.23
CHD3-211ENST00000481999 TUBA1BP68363 451 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms