RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 POMPQ9Y244 141 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 SNX13Q9Y5W8 968 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 CLCA3PQ9Y6N3 262 aa9.5□□□□□ -0.89
USP39-215ENST00000481409 FER1L5A0AVI2 2057 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 FAM186AA6NE01 2351 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 LOC102723996A0A087X1L8 192 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 AQP12BA6NM10 295 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 TNFRSF21O75509 655 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 CDC123O75794 336 aaPredicted RBP9.49□□□□□ -0.89
USP39-215ENST00000481409 PDE9AO76083 593 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 IFNA14P01570 189 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 UMPSP11172 480 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 ZNF28P17035 718 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 TNNI3P19429 210 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 MAOAP21397 527 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 MATN1P21941 496 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 PCGF2P35227 344 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 FOLR3P41439 243 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 MC3RP41968 323 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 CRATP43155 626 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 DSTNP60981 165 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 AP2B1P63010 937 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 GABREP78334 506 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 DUSP2Q05923 314 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 MGAT2Q10469 447 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 ERV3-1Q14264 604 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 SSPNQ14714 243 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 RTP5Q14D33 572 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 CYP51A1Q16850 503 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 VMACQ2NL98 169 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 GTDC1Q4AE62 458 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 GCNT6Q5T4J0 391 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 ATAD3BQ5T9A4 648 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 C1orf146Q5VVC0 180 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 MLIPQ5VWP3 458 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 LCN8Q6JVE9 175 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 ANGPTL8Q6UXH0 198 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 DHFR2Q86XF0 187 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 RNF130Q86XS8 419 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 HPS6Q86YV9 775 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 TMEM151BQ8IW70 566 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 AQP12AQ8IXF9 295 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 EID3Q8N140 333 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 FAM13CQ8NE31 585 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 C17orf47Q8NEP4 570 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 OR7G2Q8NG99 324 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 OR8K3Q8NH51 312 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 LRGUKQ96M69 825 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 RNF145Q96MT1 663 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 IP6K3Q96PC2 410 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 CRB3Q9BUF7 120 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 RBCK1Q9BYM8 510 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 RASSF4Q9H2L5 321 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 A4GALTQ9NPC4 353 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 THSD1Q9NS62 852 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 DLL3Q9NYJ7 618 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 P2RX2Q9UBL9 471 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 COPS7AQ9UBW8 275 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 C3orf18Q9UK00 162 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 ANGPT4Q9Y264 503 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 RRP15Q9Y3B9 282 aaKnown RBP9.49□□□□□ -0.89
USP39-215ENST00000481409 PCDHGA6Q9Y5G7 932 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 DMDP11532 3685 aa9.49□□□□□ -0.89
USP39-215ENST00000481409 FRYLO94915 3013 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 PTPRBP23467 1997 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 NUP214P35658 2090 aaPredicted RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 A0A1W2PNU3 283 aaPredicted RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 SAGE2PA6NJ88 616 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 C17orf105B2RV13 164 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 TGFBR3LH3BV60 316 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 ACOT8O14734 319 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 GSTA4O15217 222 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 JRKO75564 520 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 KLF7O75840 302 aaPredicted RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 HMGN2P05204 90 aaKnown RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 ARAFP10398 606 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 GGT1P19440 569 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 EFNA1P20827 205 aaPredicted RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 S1PR1P21453 382 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 MMP11P24347 488 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 LCN1P31025 176 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 MAP3K8P41279 467 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 STAT5AP42229 794 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 OR4D2P58180 307 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 ACTR3P61158 418 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 FLOT2Q14254 428 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 LTB4RQ15722 352 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 EXT1Q16394 746 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 ZNF750Q32MQ0 723 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 TRMT12Q53H54 448 aaKnown RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 EXOSC6Q5RKV6 272 aaKnown RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
USP39-215ENST00000481409 IRAK1BP1Q5VVH5 260 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 MFSD12Q6NUT3 480 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 FAM180BQ6P0A1 224 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 ZFP1Q6P2D0 407 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 CCDC80Q76M96 950 aa9.48□□□□□ -0.89
USP39-215ENST00000481409 CPEB2Q7Z5Q1 589 aaKnown RBP9.48□□□□□ -0.89
USP39-215ENST00000481409 ANKRD37Q7Z713 158 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms