RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 GATA6Q92908 595 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 RIT1Q92963 219 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 ROPN1LQ96C74 230 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 C16orf58Q96GQ5 468 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 NAF1Q96HR8 494 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 CLPTM1LQ96KA5 538 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 ZNF578Q96N58 590 aaPredicted RBP8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 ANKRD27Q96NW4 1050 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 CNPPD1Q9BV87 410 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 NUDT9Q9BW91 350 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 LRMDAQ9H2I8 198 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 NANOGQ9H9S0 305 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 EQTNQ9NQ60 294 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 ZCCHC3Q9NUD5 404 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 DDX18Q9NVP1 670 aaKnown RBP8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 NTMQ9P121 344 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 ABCD2Q9UBJ2 740 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 PCDHGA6Q9Y5G7 932 aa8.35□□□□□ -1.07
NUDCD3-208ENST00000480209 ACACAQ13085 2346 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 EML6Q6ZMW3 1958 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 A0A087WV62 115 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 IGHV1-45A0A0A0MS14 117 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 ANKRD65E5RJM6 399 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 CLIC1O00299 241 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 EMC8O43402 210 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 PRKNO60260 465 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 PLOD3O60568 738 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 CAPNS1P04632 268 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 HMGN2P05204 90 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 KRT16P08779 473 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 IFI6P09912 130 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 NUDT7P0C024 238 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 ACP2P11117 423 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 ETFAP13804 333 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 MMP11P24347 488 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 GALNSP34059 522 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 CHI3L1P36222 383 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 MAN2A2P49641 1150 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 EMDP50402 254 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 GZMMP51124 257 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 GPR143P51810 404 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 PRKAG1P54619 331 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 LRRC74AQ0VAA2 488 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 ART3Q13508 389 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 CEACAM7Q14002 265 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 LASP1Q14847 261 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 SPDYE7PQ495Y7 208 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 MFSD12Q6NUT3 480 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 PAPD4Q6PIY7 484 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 NPSR1Q6W5P4 371 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 C6orf120Q7Z4R8 191 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 YTHDF3Q7Z739 585 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 MRGPREQ86SM8 312 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 C9orf40Q8IXQ3 194 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 HORMAD2Q8N7B1 307 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 APCDD1LQ8NCL9 501 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 NUP43Q8NFH3 380 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 OR52R1Q8NGF1 315 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 OR5D16Q8NGK9 328 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 OR14A16Q8NHC5 309 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 NCLNQ969V3 563 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 UTP4Q969X6 686 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 NEURL3Q96EH8 262 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 FBXL20Q96IG2 436 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 SLC35G5Q96KT7 338 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 MS4A4EQ96PG1 132 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 PELOQ9BRX2 385 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 YIPF4Q9BSR8 244 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 ITPAQ9BY32 194 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 CADM1Q9BY67 442 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 OR8D2Q9GZM6 311 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 C1orf21Q9H246 121 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 OCEL1Q9H607 264 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 GPN2Q9H9Y4 310 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 TPT1P8Q9HAU6 139 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 SEMA3GQ9NS98 782 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 PTGFRNQ9P2B2 879 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 TMEM181Q9P2C4 612 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 C19orf53Q9UNZ5 99 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 PADI2Q9Y2J8 665 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 GMEB1Q9Y692 573 aa8.34□□□□□ -1.07
NUDCD3-208ENST00000480209 FRYQ5TBA9 3013 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 MED19A0JLT2 244 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 PRAMEF27A3QJZ7 478 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 PRORSD1PA6NEY8 169 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 PDE5AO76074 875 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 TNNI3P19429 210 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 MAP3K8P41279 467 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 SLC37A1P57057 533 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 SLC26A5P58743 744 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 RPS15P62841 145 aaKnown RBP8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 KCNJ2P63252 427 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 Q0VFX4 171 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 FUT5Q11128 374 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 ZNF155Q12901 538 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 ATP1A4Q13733 1029 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 NNATQ16517 81 aa8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 TNFAIP8L2Q6P589 184 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-208ENST00000480209 C16orf89Q6UX73 402 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms