RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 TRIM4Q9C037 500 aa9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 BATF3Q9NR55 127 aa9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 PNO1Q9NRX1 252 aaKnown RBP9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 LUZP4Q9P127 313 aa9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 NKX1-2Q9UD57 310 aaPredicted RBP9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 ZNF223Q9UK11 482 aaPredicted RBP9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 CLCA3PQ9Y6N3 262 aa9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 LRRK2Q5S007 2527 aa9.28□□□□□ -0.92
SCAMP3-206ENST00000478737 CLEC18AA5D8T8 446 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 GLOD5A6NK44 160 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 TMEM200CA6NKL6 621 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 WASHC1A8K0Z3 465 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 BBIP1A8MTZ0 92 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 A8MUA0 341 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 PGRMC2O15173 223 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 UBDO15205 165 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 KRT36O76013 467 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 IGKV3-11P04433 115 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 IL3P08700 152 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 SDC1P18827 310 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 ATP6V1C1P21283 382 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 GSTM5P46439 218 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 FOLH1Q04609 750 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 ART3Q13508 389 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 TUBA3CQ13748 450 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 INAQ16352 499 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 PRR30Q53SZ7 412 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 ZNF324BQ6AW86 544 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 FCRLBQ6BAA4 426 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 NOXRED1Q6NXP6 359 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 PGM2L1Q6PCE3 622 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 TUBA3EQ6PEY2 450 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 CLEC18BQ6UXF7 455 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 OR4N5Q8IXE1 308 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 ST13P4Q8IZP2 240 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 MMP21Q8N119 569 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 BEST3Q8N1M1 668 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 FNDC5Q8NAU1 212 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 CLEC18CQ8NCF0 446 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 FBXO27Q8NI29 283 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 C16orf78Q8WTQ4 265 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 WDR60Q8WVS4 1066 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 FAR1Q8WVX9 515 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 DNAJC9Q8WXX5 260 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 NCLNQ969V3 563 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 TM4SF18Q96CE8 201 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 SENP5Q96HI0 755 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 FCRL1Q96LA6 429 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 UTP23Q9BRU9 249 aaKnown RBP9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 CDCP1Q9H5V8 836 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 CLMPQ9H6B4 373 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 MYNNQ9NPC7 610 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 RYDENQ9NUL5 291 aaKnown RBP9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 ASF1BQ9NVP2 202 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 CES1P1Q9UKY3 287 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 DLGAP4Q9Y2H0 992 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 NTNG1Q9Y2I2 539 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 TMED5Q9Y3A6 229 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 LRRC42Q9Y546 428 aa9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 COPG1Q9Y678 874 aaKnown RBP9.27□□□□□ -0.93
SCAMP3-206ENST00000478737 EML6Q6ZMW3 1958 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 LOC100653049A0A140TA62 436 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 C1orf226A1L170 272 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 GABRR3A8MPY1 467 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 C17orf105B2RV13 164 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 PYCARD-AS1I3L0S3 204 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 PRAMEF2O60811 474 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 KRT34O76011 436 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 NEURL1O76050 574 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 ZFAND5O76080 213 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 IFNA16P05015 189 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 SLC35E2P0CK97 266 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 HPCAL1P37235 193 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 HLCSP50747 726 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 PLIN5Q00G26 463 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 C6orf136Q5SQH8 315 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 ZNF468Q5VIY5 522 aaPredicted RBP9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 ZFP1Q6P2D0 407 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 HACD2Q6Y1H2 254 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 IKBIPQ70UQ0 350 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 ATCAYQ86WG3 371 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 ZNF227Q86WZ6 799 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 CLHC1Q8NHS4 586 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 ZNF721Q8TF20 911 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 UCN3Q969E3 161 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 SCMH1Q96GD3 660 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 TSSK3Q96PN8 268 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 TAAR6Q96RI8 345 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 SLX1AQ9BQ83 275 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 PELOQ9BRX2 385 aaKnown RBP9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 MIEF1Q9NQG6 463 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 TMEM45AQ9NWC5 275 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 ABI3Q9P2A4 366 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 MYOTQ9UBF9 498 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 WBP11Q9Y2W2 641 aaKnown RBP9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 PCDHA9Q9Y5H5 950 aa9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 USP9XQ93008 2570 aaPredicted RBP9.26□□□□□ -0.93
SCAMP3-206ENST00000478737 TRBV11-1A0A0K0K1C0 115 aa9.25□□□□□ -0.93
SCAMP3-206ENST00000478737 MYOCOSA0A1B0GUC4 107 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms