RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 GALNT8Q9NY28 637 aa8.8□□□□□ -1
CCM2-210ENST00000478169 NDRG3Q9UGV2 375 aa8.8□□□□□ -1
CCM2-210ENST00000478169 COL6A5A8TX70 2615 aa8.79□□□□□ -1
CCM2-210ENST00000478169 WASHC1A8K0Z3 465 aa8.79□□□□□ -1
CCM2-210ENST00000478169 CXorf49A8MYA2 514 aaPredicted RBP8.79□□□□□ -1
CCM2-210ENST00000478169 SUPT3HB4E1H0 165 aa8.79□□□□□ -1
CCM2-210ENST00000478169 H0YIV9 168 aa8.79□□□□□ -1
CCM2-210ENST00000478169 GNB5O14775 395 aa8.79□□□□□ -1
CCM2-210ENST00000478169 TMPRSS11DO60235 418 aa8.79□□□□□ -1
CCM2-210ENST00000478169 UGDHO60701 494 aa8.79□□□□□ -1
CCM2-210ENST00000478169 SMPD2O60906 423 aa8.79□□□□□ -1
CCM2-210ENST00000478169 KERAO60938 352 aa8.79□□□□□ -1
CCM2-210ENST00000478169 SUPT3HO75486 399 aa8.79□□□□□ -1
CCM2-210ENST00000478169 EEDO75530 441 aaKnown RBP8.79□□□□□ -1
CCM2-210ENST00000478169 PIAS1O75925 651 aa8.79□□□□□ -1
CCM2-210ENST00000478169 AIFM1O95831 613 aa8.79□□□□□ -1
CCM2-210ENST00000478169 ABCB1P08183 1280 aaPredicted RBP8.79□□□□□ -1
CCM2-210ENST00000478169 RHOXF2BP0C7M4 288 aa8.79□□□□□ -1
CCM2-210ENST00000478169 TCP1P17987 556 aaKnown RBP8.79□□□□□ -1
CCM2-210ENST00000478169 KRT15P19012 456 aa8.79□□□□□ -1
CCM2-210ENST00000478169 CHMP24386 653 aa8.79□□□□□ -1
CCM2-210ENST00000478169 PIK3R1P27986 724 aa8.79□□□□□ -1
CCM2-210ENST00000478169 ABCD3P28288 659 aa8.79□□□□□ -1
CCM2-210ENST00000478169 GP5P40197 560 aa8.79□□□□□ -1
CCM2-210ENST00000478169 PCYT1AP49585 367 aa8.79□□□□□ -1
CCM2-210ENST00000478169 DIO3P55073 304 aa8.79□□□□□ -1
CCM2-210ENST00000478169 RPS13P62277 151 aaKnown RBP8.79□□□□□ -1
CCM2-210ENST00000478169 SNTA1Q13424 505 aa8.79□□□□□ -1
CCM2-210ENST00000478169 GAB1Q13480 694 aa8.79□□□□□ -1
CCM2-210ENST00000478169 Q5PR19 223 aa8.79□□□□□ -1
CCM2-210ENST00000478169 SLC30A6Q6NXT4 461 aa8.79□□□□□ -1
CCM2-210ENST00000478169 ENPP6Q6UWR7 440 aa8.79□□□□□ -1
CCM2-210ENST00000478169 LUZP2Q86TE4 346 aa8.79□□□□□ -1
CCM2-210ENST00000478169 YRDCQ86U90 279 aaKnown RBP8.79□□□□□ -1
CCM2-210ENST00000478169 NUDT13Q86X67 352 aa8.79□□□□□ -1
CCM2-210ENST00000478169 PRIMA1Q86XR5 153 aa8.79□□□□□ -1
CCM2-210ENST00000478169 KLHL7Q8IXQ5 586 aa8.79□□□□□ -1
CCM2-210ENST00000478169 ZNF615Q8N8J6 731 aa8.79□□□□□ -1
CCM2-210ENST00000478169 OR7G1Q8NGA0 311 aa8.79□□□□□ -1
CCM2-210ENST00000478169 PYROXD1Q8WU10 500 aa8.79□□□□□ -1
CCM2-210ENST00000478169 ATOH8Q96SQ7 321 aa8.79□□□□□ -1
CCM2-210ENST00000478169 TUBA1CQ9BQE3 449 aa8.79□□□□□ -1
CCM2-210ENST00000478169 BDH2Q9BUT1 245 aa8.79□□□□□ -1
CCM2-210ENST00000478169 METTL7AQ9H8H3 244 aa8.79□□□□□ -1
CCM2-210ENST00000478169 RAI1Q7Z5J4 1906 aaPredicted RBP8.79□□□□□ -1
CCM2-210ENST00000478169 CHD3Q12873 2000 aaKnown RBP8.78□□□□□ -1
CCM2-210ENST00000478169 PCNX3Q9H6A9 2034 aa8.78□□□□□ -1
CCM2-210ENST00000478169 CCDC189A1A4V9 331 aa8.78□□□□□ -1
CCM2-210ENST00000478169 SYCE1LA8MT33 242 aa8.78□□□□□ -1
CCM2-210ENST00000478169 EFCAB8A8MWE9 144 aa8.78□□□□□ -1
CCM2-210ENST00000478169 A8MXE2 369 aa8.78□□□□□ -1
CCM2-210ENST00000478169 H0Y3Z8 333 aa8.78□□□□□ -1
CCM2-210ENST00000478169 UBXN8O00124 270 aa8.78□□□□□ -1
CCM2-210ENST00000478169 FOXE1O00358 373 aaPredicted RBP8.78□□□□□ -1
CCM2-210ENST00000478169 SNPHO15079 494 aa8.78□□□□□ -1
CCM2-210ENST00000478169 PGRMC2O15173 223 aa8.78□□□□□ -1
CCM2-210ENST00000478169 PPM1BO75688 479 aa8.78□□□□□ -1
CCM2-210ENST00000478169 CBR3O75828 277 aa8.78□□□□□ -1
CCM2-210ENST00000478169 LTA4HP09960 611 aaKnown RBP8.78□□□□□ -1
CCM2-210ENST00000478169 CT62P0C5K7 136 aa8.78□□□□□ -1
CCM2-210ENST00000478169 FPR1P21462 350 aa8.78□□□□□ -1
CCM2-210ENST00000478169 GPX3P22352 226 aa8.78□□□□□ -1
CCM2-210ENST00000478169 SSTR1P30872 391 aa8.78□□□□□ -1
CCM2-210ENST00000478169 SPRP35270 261 aaPredicted RBP8.78□□□□□ -1
CCM2-210ENST00000478169 SOX18P35713 384 aa8.78□□□□□ -1
CCM2-210ENST00000478169 GRTP1Q5TC63 336 aa8.78□□□□□ -1
CCM2-210ENST00000478169 C6orf163Q5TEZ5 329 aa8.78□□□□□ -1
CCM2-210ENST00000478169 ANGPTL8Q6UXH0 198 aa8.78□□□□□ -1
CCM2-210ENST00000478169 NUP54Q7Z3B4 507 aa8.78□□□□□ -1
CCM2-210ENST00000478169 TBC1D1Q86TI0 1168 aaPredicted RBP8.78□□□□□ -1
CCM2-210ENST00000478169 MYLK4Q86YV6 388 aaPredicted RBP8.78□□□□□ -1
CCM2-210ENST00000478169 TEX9Q8N6V9 391 aa8.78□□□□□ -1
CCM2-210ENST00000478169 SIMC1Q8NDZ2 872 aa8.78□□□□□ -1
CCM2-210ENST00000478169 OR4K14Q8NGD5 310 aa8.78□□□□□ -1
CCM2-210ENST00000478169 SLC44A1Q8WWI5 657 aa8.78□□□□□ -1
CCM2-210ENST00000478169 UCN3Q969E3 161 aa8.78□□□□□ -1
CCM2-210ENST00000478169 INTS12Q96CB8 462 aaKnown RBP8.78□□□□□ -1
CCM2-210ENST00000478169 MDFIQ99750 246 aa8.78□□□□□ -1
CCM2-210ENST00000478169 OR2B2Q9GZK3 357 aa8.78□□□□□ -1
CCM2-210ENST00000478169 ACTR8Q9H981 624 aa8.78□□□□□ -1
CCM2-210ENST00000478169 CLCF1Q9UBD9 225 aa8.78□□□□□ -1
CCM2-210ENST00000478169 PACSIN3Q9UKS6 424 aa8.78□□□□□ -1
CCM2-210ENST00000478169 EXO1Q9UQ84 846 aaKnown RBP8.78□□□□□ -1
CCM2-210ENST00000478169 CFL2Q9Y281 166 aa8.78□□□□□ -1
CCM2-210ENST00000478169 TESMINQ9Y4I5 508 aa8.78□□□□□ -1
CCM2-210ENST00000478169 ANGPTL3Q9Y5C1 460 aa8.78□□□□□ -1
CCM2-210ENST00000478169 A0A1W2PS29 197 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 TCRBV9S1A1TA0A576 114 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 FAM159BA6NKW6 160 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 KIAA1324LA8MWY0 1029 aaPredicted RBP8.77□□□□□ -1.01
CCM2-210ENST00000478169 H7C1Q1 480 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 CCDC188H7C350 402 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 MSTNO14793 375 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 ACOX3O15254 700 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 EIF3HO15372 352 aaKnown RBP eCLIP8.77□□□□□ -1.01
CCM2-210ENST00000478169 CTIFO43310 598 aaKnown RBP8.77□□□□□ -1.01
CCM2-210ENST00000478169 ICOSLGO75144 302 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 SEMA3DO95025 777 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 CRHP06850 196 aa8.77□□□□□ -1.01
CCM2-210ENST00000478169 MTHFD2P13995 350 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms