RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DEFB110Q30KQ9 67 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 GPRIN1Q7Z2K8 1008 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 SLCO3A1Q9UIG8 710 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 ACSL6Q9UKU0 697 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.72■□□□□ 0.43
VARS2-209ENST00000477288 TRIM64CA6NLI5 447 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 A8MVJ9 347 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 GCGRP47871 477 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 ACTC1P68032 377 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 ACTA1P68133 377 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 TIFABQ6ZNK6 161 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 FAM46BQ96A09 425 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 IMP4Q96G21 291 aaKnown RBP17.72■□□□□ 0.43
VARS2-209ENST00000477288 SGCZQ96LD1 299 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 RPH3AQ9Y2J0 694 aaPredicted RBP17.72■□□□□ 0.43
VARS2-209ENST00000477288 SPEF2Q9C093 1822 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 A0A096LPI6 279 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 A0A0G2JMP0 313 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 ANKRD28O15084 1053 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 PSPHP78330 225 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 C10orf62Q5T681 223 aaPredicted RBP17.71■□□□□ 0.43
VARS2-209ENST00000477288 BCL2L15Q5TBC7 163 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 VASH1Q7L8A9 365 aaPredicted RBP17.71■□□□□ 0.43
VARS2-209ENST00000477288 OR4M2Q8NGB6 313 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 GPR37L1O60883 481 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 ARSFP54793 590 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 SERINC5Q86VE9 423 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 OR10T2Q8NGX3 314 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 DOHHQ9BU89 302 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 ARHGAP39Q9C0H5 1083 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 A0A1W2PPW3 197 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 RTCAO00442 366 aaKnown RBP17.71■□□□□ 0.43
VARS2-209ENST00000477288 TGM5O43548 720 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 RGS9O75916 674 aaPredicted RBP17.71■□□□□ 0.43
VARS2-209ENST00000477288 RING1Q06587 406 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 RPL13AP3Q6NVV1 102 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 UGT2A3Q6UWM9 527 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 SIAH1Q8IUQ4 282 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 HDAC2Q92769 488 aaKnown RBP17.71■□□□□ 0.43
VARS2-209ENST00000477288 DDIT4LQ96D03 193 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 SOX17Q9H6I2 414 aaPredicted RBP17.71■□□□□ 0.43
VARS2-209ENST00000477288 KCNK12Q9HB15 430 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 LIPT1Q9Y234 373 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 PCDH17O14917 1159 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 H2AFB2P0C5Z0 115 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 GSTM4Q03013 218 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 IGDCC3Q8IVU1 814 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 HS3ST5Q8IZT8 346 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 ZFP41Q8N8Y5 198 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 OR52E2Q8NGJ4 325 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 TSNAXQ99598 290 aaKnown RBP17.71■□□□□ 0.43
VARS2-209ENST00000477288 MAP3K3Q99759 626 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 SLC17A9Q9BYT1 436 aa17.71■□□□□ 0.43
VARS2-209ENST00000477288 ROBO1Q9Y6N7 1651 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 ADRB3P13945 408 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 IL1RNP18510 177 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 RABIFP47224 123 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 ATP4BP51164 291 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 DSC1Q08554 894 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 MOGQ16653 247 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 FIGLAQ6QHK4 219 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 ZFAND4Q86XD8 727 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 RHBDD1Q8TEB9 315 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 FCRL3Q96P31 734 aaPredicted RBP17.71■□□□□ 0.42
VARS2-209ENST00000477288 TBCCD1Q9NVR7 557 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 MYEF2Q9P2K5 600 aaKnown RBP17.71■□□□□ 0.42
VARS2-209ENST00000477288 ERVK-19Q9WJR5 959 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 RNF215Q9Y6U7 377 aa17.71■□□□□ 0.42
VARS2-209ENST00000477288 ERP29P30040 261 aaKnown RBP17.7■□□□□ 0.42
VARS2-209ENST00000477288 ABHD17BQ5VST6 288 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 EEF1A1P5Q5VTE0 462 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 GPR139Q6DWJ6 353 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 DPH2Q9BQC3 489 aaPredicted RBP17.7■□□□□ 0.42
VARS2-209ENST00000477288 RAB15P59190 212 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 SIM1P81133 766 aaPredicted RBP17.7■□□□□ 0.42
VARS2-209ENST00000477288 GRM7Q14831 915 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 IGFN1Q86VF2 1251 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 Q8N402 240 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 MSANTD3Q96H12 275 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 MUS81Q96NY9 551 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 SLC2A11Q9BYW1 496 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 POT1Q9NUX5 634 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 HAO2Q9NYQ3 351 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 COL1A1P02452 1464 aaPredicted RBP17.7■□□□□ 0.42
VARS2-209ENST00000477288 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 TNFSF12O43508 249 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 PSAPL1Q6NUJ1 521 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 C6orf120Q7Z4R8 191 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 CPEB1Q9BZB8 566 aaKnown RBP17.7■□□□□ 0.42
VARS2-209ENST00000477288 PPP1R14DQ9NXH3 145 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 HTRA2O43464 458 aaPredicted RBP17.7■□□□□ 0.42
VARS2-209ENST00000477288 CD53P19397 219 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 BDH1Q02338 343 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 LEG1Q6P5S2 330 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 HACD2Q6Y1H2 254 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 RPLP0P6Q8NHW5 317 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 CREB3L4Q8TEY5 395 aa17.7■□□□□ 0.42
VARS2-209ENST00000477288 GCDHQ92947 438 aaPredicted RBP17.7■□□□□ 0.42
VARS2-209ENST00000477288 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms