RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 FAM47E-STBD1D6RA91 191 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 RGS16O15492 202 aaPredicted RBP9.41□□□□□ -0.9
CCM2-208ENST00000476594 SUSD5O60279 629 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 NPHS1O60500 1241 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 HCN1O60741 890 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 SEC22BO75396 215 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 NADKO95544 446 aaPredicted RBP9.41□□□□□ -0.9
CCM2-208ENST00000476594 CLDN1O95832 211 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 RNF224P0DH78 156 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 DDCP20711 480 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 GPX3P22352 226 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 MAPK1P28482 360 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 DNASE1L1P49184 302 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 MAN2A2P49641 1150 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 MRPS22P82650 360 aaKnown RBP9.41□□□□□ -0.9
CCM2-208ENST00000476594 C2orf80Q0P641 193 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 PLCXD2Q0VAA5 305 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 PCLAFQ15004 111 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 SF3B4Q15427 424 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCM2-208ENST00000476594 KRT71Q3SY84 523 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 RNFT1Q5M7Z0 435 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 WLSQ5T9L3 541 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 PRAMEF20Q5VT98 475 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 RNF165Q6ZSG1 346 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 CD163Q86VB7 1156 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 PACS2Q86VP3 889 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 LURAP1LQ8IV03 231 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 ZNF615Q8N8J6 731 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 ZNF441Q8N8Z8 693 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 BANPQ8N9N5 519 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 OR52N2Q8NGI0 321 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 OR2W6PQ8NHA6 318 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 ZFP28Q8NHY6 868 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 PPP1R14CQ8TAE6 165 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 ITLN2Q8WWU7 325 aaPredicted RBP9.41□□□□□ -0.9
CCM2-208ENST00000476594 ASB5Q8WWX0 329 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 EXOSC8Q96B26 276 aaKnown RBP9.41□□□□□ -0.9
CCM2-208ENST00000476594 LCORQ96JN0 433 aaPredicted RBP9.41□□□□□ -0.9
CCM2-208ENST00000476594 JSRP1Q96MG2 331 aaPredicted RBP9.41□□□□□ -0.9
CCM2-208ENST00000476594 FAM111AQ96PZ2 611 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 CCT7Q99832 543 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 DEFB127Q9H1M4 99 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 METTL7AQ9H8H3 244 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 MYNNQ9NPC7 610 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 SLC35C2Q9NQQ7 365 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 DEPPQ9NTK1 212 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 C1orf109Q9NX04 203 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 TAS2R9Q9NYW1 312 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 MAT2BQ9NZL9 334 aa9.41□□□□□ -0.9
CCM2-208ENST00000476594 MYO7BQ6PIF6 2116 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 TRGV5A0A0B4J1U4 118 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ATP6AP2A0A1C7CYW4 349 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 FRG2CA6NGY1 282 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 CYSRT1A8MQ03 144 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 TMEM114B3SHH9 223 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 NPIPB8E9PQR5 432 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 G3V3Y1 287 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 AQP7O14520 342 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 UBFD1O14562 309 aaKnown RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 HNRNPRO43390 633 aaKnown RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 PPM1BO75688 479 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ATP6AP2O75787 350 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 GLSO94925 669 aaPredicted RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 SNUPNO95149 360 aaKnown RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 IGHG3P01860 377 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 HOXD4P09016 255 aaPredicted RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 CT62P0C5K7 136 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 GABRA1P14867 456 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 CHN1P15882 459 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 PRPH2P23942 346 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ELAVL4P26378 380 aaKnown RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 GDF1P27539 372 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ABCD3P28288 659 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 PIGAP37287 484 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 RPL3P39023 403 aaKnown RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 MAGEA5P43359 124 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 PPICP45877 212 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ASMTP46597 345 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 HSF1Q00613 529 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ZNHIT3Q15649 155 aaPredicted RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 SCIMPQ6UWF3 145 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ACAD11Q709F0 780 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 NUP54Q7Z3B4 507 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 DOLPP1Q86YN1 238 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 CCDC116Q8IYX3 515 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 CLYBLQ8N0X4 340 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 TMEM251Q8N6I4 163 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ADCY4Q8NFM4 1077 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 OR10G3Q8NGC4 313 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 OR52R1Q8NGF1 315 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 OR5M3Q8NGP4 307 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 TCP10LQ8TDR4 215 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 DOK4Q8TEW6 326 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 CA5BP1Q8WTZ4 195 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 UCN3Q969E3 161 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 ADIPOR1Q96A54 375 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 CTHRC1Q96CG8 243 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 TMCO6Q96DC7 493 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 CNRIP1Q96F85 164 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms