RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 P3H4Q92791 437 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 RPL3LQ92901 407 aaKnown RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 IFT74Q96LB3 600 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 TESK2Q96S53 571 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 NPY6RQ99463 290 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 OMDQ99983 421 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 C11orf70Q9BRQ4 267 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 CCM2Q9BSQ5 444 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 STMN4Q9H169 189 aaPredicted RBP3.74□□□□□ -1.81
VPS13D-207ENST00000476169 IL25Q9H293 177 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 LPAR2Q9HBW0 351 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 MED17Q9NVC6 651 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 FLRT3Q9NZU0 649 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 FBXL4Q9UKA2 621 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 FZR1Q9UM11 496 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 PIGLQ9Y2B2 252 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 SLC6A5Q9Y345 797 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 WDR45Q9Y484 360 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 CLASP1Q7Z460 1538 aa3.74□□□□□ -1.81
VPS13D-207ENST00000476169 COL3A1P02461 1466 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 RNF123Q5XPI4 1314 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PRG4Q92954 1404 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 TRAV26-1A0A087WT03 109 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PPIAL4CA0A0B4J2A2 164 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 TRBV4-1A0A0J9YWV2 114 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 CLEC18AA5D8T8 446 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 MYMKA6NI61 221 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SRRM3A6NNA2 597 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 HNRNPCL2B2RXH8 293 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PROB1E7EW31 1015 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SPECC1L-ADORA2AF8WAN1 911 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 H0YL77 283 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 KIAA0513O60268 411 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 TPST2O60704 377 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 BBOX1O75936 387 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 NXPH2O95156 264 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 BAG4O95429 457 aaKnown RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 HPRP00739 348 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 NR3C1P04150 777 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 RHOXF2BP0C7M4 288 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PPIAL4GP0DN37 164 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PRKAR1AP10644 381 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 EFNA1P20827 205 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 ANP32AP39687 249 aaKnown RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 CCR4P51679 360 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 RAG2P55895 527 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SEC61GP60059 68 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 BTG1P62324 171 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 CDKL1Q00532 357 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SNTA1Q13424 505 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 KLF5Q13887 457 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 DOC2AQ14183 400 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 GRB14Q14449 540 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 C3AR1Q16581 482 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 LRIT3Q3SXY7 679 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PDLIM3Q53GG5 364 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SLC25A53Q5H9E4 307 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SIRPB2Q5JXA9 342 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SPANXN2Q5MJ10 180 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 TCHHL1Q5QJ38 904 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 Q71RC1 249 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 Q7L0L9 218 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 FCRLAQ7L513 359 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 G2E3Q7L622 706 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 TRPM8Q7Z2W7 1104 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 CDR2LQ86X02 465 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SPATA2LQ8IUW3 424 aaPredicted RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 IQCF2Q8IXL9 164 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 OFCC1Q8IZS5 231 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 LINC00518Q8N0U6 118 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PYROXD2Q8N2H3 581 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 TEX26Q8N6G2 289 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SYT14Q8NB59 555 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 CLEC18CQ8NCF0 446 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SPATA4Q8NEY3 305 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 BPIFCQ8NFQ6 507 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 STXBP6Q8NFX7 210 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 OLIG1Q8TAK6 271 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 FAM81AQ8TBF8 368 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SUSD6Q92537 303 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 MRPL24Q96A35 216 aaKnown RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 ADGRG7Q96K78 797 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 C17orf77Q96MU5 243 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 CASD1Q96PB1 797 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 ACCSQ96QU6 501 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 RIT2Q99578 217 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 IL12RB2Q99665 862 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PSD2Q9BQI7 771 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 RHOXF2Q9BQY4 288 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 SIKE1Q9BRV8 207 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 TRIM9Q9C026 710 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 IQCGQ9H095 443 aaKnown RBP3.73□□□□□ -1.81
VPS13D-207ENST00000476169 EGLN3Q9H6Z9 239 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 POLD4Q9HCU8 107 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 RPH3ALQ9UNE2 315 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 PIK3R4Q99570 1358 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 ABCA5Q8WWZ7 1642 aa3.73□□□□□ -1.81
VPS13D-207ENST00000476169 MROH5Q6ZUA9 1318 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CEP170Q5SW79 1584 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 A0A1W2PPI3 338 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms