RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 IL7P13232 177 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ANXA7P20073 488 aaKnown RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ABCD3P28288 659 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 CPOXP36551 454 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 PMELP40967 661 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 GZMKP49863 264 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF846Q147U1 533 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 IMPG1Q17R60 797 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ALKBH6Q3KRA9 238 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 CCSMST1Q4G0I0 132 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 HSF5Q4G112 596 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ARMCX4Q5H9R4 360 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 SYPL2Q5VXT5 272 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 TBC1D3GQ6DHY5 549 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 FAM199XQ6PEV8 388 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 TCF24Q7RTU0 167 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 TECPR1Q7Z6L1 1165 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 CFAP206Q8IYR0 622 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 AMER2Q8N7J2 671 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 BEND2Q8NDZ0 799 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 NLGN2Q8NFZ4 835 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 OR4A15Q8NGL6 344 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 OR56A3Q8NH54 315 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 NUBPLQ8TB37 319 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 BCL2L2Q92843 193 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 STMN2Q93045 179 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 P2RX5Q93086 422 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 HGDQ93099 445 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 FOXN4Q96NZ1 517 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 RBP7Q96R05 134 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 THUMPD3Q9BV44 507 aaKnown RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 TRIM9Q9C026 710 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 METTL1Q9UBP6 276 aaKnown RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 INTS6Q9UL03 887 aaKnown RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MKLN1Q9UL63 735 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 A0A1W2PQL4 384 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 OR2W5A6NFC9 320 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 PRR23D1E9PI22 279 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 G3V2T6 193 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 TEX46H3BTG2 121 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 DLGAP1O14490 977 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ICOSLGO75144 302 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MPC2O95563 127 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MPOP05164 745 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ALPLP05186 524 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 PRR23D2P0DMB1 279 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ITGA4P13612 1032 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MYOGP15173 224 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 PAICSP22234 425 aaKnown RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 CLCN3P51790 818 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 BCAT1P54687 386 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 PDIA2Q13087 525 aaKnown RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 GPNMBQ14956 572 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF699Q32M78 642 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 TANGO2Q6ICL3 276 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MED27Q6P2C8 311 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 FIGLAQ6QHK4 219 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MFSD7Q6UXD7 560 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF620Q6ZNG0 422 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 OOSP2Q86WS3 158 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 OR52J3Q8NH60 311 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 GPR88Q9GZN0 384 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 SAP130Q9H0E3 1048 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 SLCO5A1Q9H2Y9 848 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MFSD1Q9H3U5 465 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 POLR1BQ9H9Y6 1135 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 LTB4R2Q9NPC1 389 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 MKKSQ9NPJ1 570 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 FAM207AQ9NSI2 230 aaPredicted RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 ZCCHC3Q9NUD5 404 aaKnown RBP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 TAB2Q9NYJ8 693 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 OPN4Q9UHM6 478 aa4.61□□□□□ -1.67
NPHP3-206ENST00000474871 SF3B1O75533 1304 aaKnown RBP eCLIP4.61□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF27A3QJZ7 478 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF25A6NGN4 478 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ARHGAP42A6NI28 874 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 NKX6-3A6NJ46 265 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF26H0Y7S4 382 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RPL36A-HNRNPH2H7BZ11 118 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 KDELR3O43731 214 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 HPGDSO60760 199 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF4O60810 478 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF11O60813 436 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 UPK1BO75841 260 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ZMPSTE24O75844 475 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ATP6V1B2P21281 511 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ACADLP28330 430 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 CA5AP35218 305 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PNPLA4P41247 253 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 GABRA4P48169 554 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 RFX2P48378 723 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 ARF6P62330 175 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 REEP5Q00765 189 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 SF3A3Q12874 501 aaKnown RBP eCLIP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 INPP5JQ15735 1006 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MAN2A1Q16706 1144 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 MPEG1Q2M385 716 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF5Q5TYX0 476 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF9Q5VWM5 478 aa4.6□□□□□ -1.67
NPHP3-206ENST00000474871 PRAMEF6Q5VXH4 476 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms