RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 OR52E8Q6IFG1 317 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 TBC1D1Q86TI0 1168 aaPredicted RBP12.77□□□□□ -0.37
CCDC78-209ENST00000474647 NUDT13Q86X67 352 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 KRTAP1-3Q8IUG1 177 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 ZNF441Q8N8Z8 693 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 OR1J4Q8NGS1 313 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 TP53INP1Q96A56 240 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 TMEM41AQ96HV5 264 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 LRRC1Q9BTT6 524 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 ZNF717Q9BY31 904 aaPredicted RBP12.77□□□□□ -0.37
CCDC78-209ENST00000474647 OR10A5Q9H207 317 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 ACTR8Q9H981 624 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 CALHM2Q9HA72 323 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 CXorf21Q9HAI6 301 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 NMRAL1Q9HBL8 299 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 SAYSD1Q9NPB0 183 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 JKAMPQ9P055 326 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 SNX24Q9Y343 169 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 PCDHGA11Q9Y5H2 935 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 TLN2Q9Y4G6 2542 aa12.77□□□□□ -0.37
CCDC78-209ENST00000474647 A0A1W2PPR1 153 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 TCRBV9S1A1TA0A576 114 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 IL18BPO95998 194 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 HEXAP06865 529 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 NT5EP21589 574 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 PTX3P26022 381 aaPredicted RBP12.76□□□□□ -0.37
CCDC78-209ENST00000474647 ABCD3P28288 659 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 PTPN6P29350 595 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 GALNSP34059 522 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 BSGP35613 385 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 SOX18P35713 384 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 CPOXP36551 454 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 ARL1P40616 181 aaPredicted RBP12.76□□□□□ -0.37
CCDC78-209ENST00000474647 SLCO1A2P46721 670 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 MRPS25P82663 173 aaKnown RBP12.76□□□□□ -0.37
CCDC78-209ENST00000474647 SRYQ05066 204 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 DLG1Q12959 904 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 CPSF6Q16630 551 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC78-209ENST00000474647 Q5PR19 223 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 MRM1Q6IN84 353 aaKnown RBP12.76□□□□□ -0.37
CCDC78-209ENST00000474647 PLXDC2Q6UX71 529 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 ISCA2Q86U28 154 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 P3H2Q8IVL5 708 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 GCNT2Q8N0V5 402 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 NUDT8Q8WV74 236 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 REPS1Q96D71 796 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 ATOH8Q96SQ7 321 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 SECISBP2Q96T21 854 aaKnown RBP12.76□□□□□ -0.37
CCDC78-209ENST00000474647 TUBA1CQ9BQE3 449 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 ERP44Q9BS26 406 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 RAB17Q9H0T7 212 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 KLRF1Q9NZS2 232 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 MAPRE3Q9UPY8 281 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 EIF3LQ9Y262 564 aaKnown RBP12.76□□□□□ -0.37
CCDC78-209ENST00000474647 DTX4Q9Y2E6 619 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 IKBKGQ9Y6K9 419 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 JMJD1CQ15652 2540 aa12.76□□□□□ -0.37
CCDC78-209ENST00000474647 C2orf72A6NCS6 295 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 CASKO14936 926 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 ACTL6AO96019 429 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 LTA4HP09960 611 aaKnown RBP12.75□□□□□ -0.37
CCDC78-209ENST00000474647 GFAPP14136 432 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 SPRP35270 261 aaPredicted RBP12.75□□□□□ -0.37
CCDC78-209ENST00000474647 PIK3CGP48736 1102 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 ARFIP1P53367 373 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 SHEQ5VZ18 495 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 LIPJQ5W064 366 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 TIGD3Q6B0B8 471 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 DESI1Q6ICB0 168 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 FBN3Q75N90 2809 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 OR14L1PQ8NHC6 308 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 RDH11Q8TC12 318 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 ZPLD1Q8TCW7 415 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 SLC44A1Q8WWI5 657 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 ADIPOR1Q96A54 375 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 INTS12Q96CB8 462 aaKnown RBP12.75□□□□□ -0.37
CCDC78-209ENST00000474647 DACH2Q96NX9 599 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 TM9SF2Q99805 663 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 SFXN3Q9BWM7 321 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 OSBPL11Q9BXB4 747 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 DPH5Q9H2P9 285 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 DDX31Q9H8H2 851 aaKnown RBP12.75□□□□□ -0.37
CCDC78-209ENST00000474647 GALNT9Q9HCQ5 603 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
CCDC78-209ENST00000474647 UTP11Q9Y3A2 253 aaKnown RBP12.75□□□□□ -0.37
CCDC78-209ENST00000474647 CHD3Q12873 2000 aaKnown RBP12.74□□□□□ -0.37
CCDC78-209ENST00000474647 LRRC14BA6NHZ5 514 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 SYCE1LA8MT33 242 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 FAM171A2A8MVW0 826 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 PGRMC2O15173 223 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 ARHGEF9O43307 516 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 GPX3P22352 226 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 NEK2P51955 445 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 FUT7Q11130 342 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 CALCOCO2Q13137 446 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 CUL3Q13618 768 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 PFKFB4Q16877 469 aa12.74□□□□□ -0.37
CCDC78-209ENST00000474647 ENPP6Q6UWR7 440 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms