RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 BRINP2Q9C0B6 783 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 NFU1Q9UMS0 254 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 ZNF780BQ9Y6R6 833 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 A0A0G2JNJ9 132 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 OR4F21O95013 312 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 LRATO95237 230 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 TSPAN8P19075 237 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 S1PR1P21453 382 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 GPX3P22352 226 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 ATP5F1P24539 256 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 ABCD3P28288 659 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 MASP1P48740 699 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 CSTF3Q12996 717 aaKnown RBP18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 SF3B4Q15427 424 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 PRICKLE4Q2TBC4 344 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 SLC25A35Q3KQZ1 300 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 ZNF678Q5SXM1 525 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 RIPPLY2Q5TAB7 128 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 SLC22A9Q8IVM8 553 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 C1orf52Q8N6N3 182 aaKnown RBP18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 CDYL2Q8N8U2 506 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 KLHL29Q96CT2 875 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 RILPQ96NA2 401 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 SLC6A15Q9H2J7 730 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 Q9UFV3 132 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 KCNN3Q9UGI6 736 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 BCAP29Q9UHQ4 241 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 ZNF225Q9UK10 706 aa18.67■□□□□ 0.58
PDLIM4-206ENST00000474421 C15orf38-AP3S2A0A0A6YYH1 394 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 CCDC151A5D8V7 595 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 AHRRA9YTQ3 701 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 MANBAO00462 879 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 ACOX3O15254 700 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 ULK1O75385 1050 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 TRAPPC6AO75865 159 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 IMPDH1P20839 514 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 FEN1P39748 380 aaKnown RBP18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 DCAF7P61962 342 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 UNC50Q53HI1 259 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 GPRIN3Q6ZVF9 776 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 ULK2Q8IYT8 1036 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 SAMD14Q8IZD0 417 aaPredicted RBP18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 GBP7Q8N8V2 638 aaPredicted RBP18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 ACMSDQ8TDX5 336 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 HSPBAP1Q96EW2 488 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 TMEM41AQ96HV5 264 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 MAT2BQ9NZL9 334 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 TMEM216Q9P0N5 145 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 PRODH2Q9UF12 536 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 FETUBQ9UGM5 382 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 MCM8Q9UJA3 840 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 AKAP9Q99996 3911 aa18.66■□□□□ 0.58
PDLIM4-206ENST00000474421 HSPB2A8KAH6 182 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 RIPK2O43353 540 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 DLX3O60479 287 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 PPM1BO75688 479 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 ESRRBO95718 433 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 HPNP05981 417 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 GSTA1P08263 222 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 GCAP28676 217 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 HMOX2P30519 316 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 CASP3P42574 277 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 TRPC1P48995 793 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 ALDH9A1P49189 494 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 CDK9P50750 372 aaKnown RBP18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 KRTAP10-9P60411 292 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 MGAT2Q10469 447 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 DUSP8Q13202 625 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 HSPB2Q16082 182 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 CES4AQ5XG92 561 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 CDH24Q86UP0 819 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 PM20D2Q8IYS1 436 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 METTL6Q8TCB7 284 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 LCORQ96JN0 433 aaPredicted RBP18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 TMEM237Q96Q45 408 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 ZNF559Q9BR84 538 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 NXF5Q9H1B4 397 aaKnown RBP18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 UBQLN3Q9H347 655 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 METTL7AQ9H8H3 244 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 ZNF639Q9UID6 485 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 C15orf41Q9Y2V0 281 aa18.65■□□□□ 0.58
PDLIM4-206ENST00000474421 ENO1P06733 434 aaKnown RBP18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 ABCB1P08183 1280 aaPredicted RBP18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 DRD2P14416 443 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 ADH7P40394 386 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 PRKAA2P54646 552 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 PKNOX1P55347 436 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 LCP2Q13094 533 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 SPIN4Q56A73 249 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 BICRALQ6AI39 1079 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 TMEM81Q6P7N7 255 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 FAM111BQ6SJ93 734 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 NUP54Q7Z3B4 507 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 PRR22Q8IZ63 422 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 CTHRC1Q96CG8 243 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 ERP27Q96DN0 273 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 HBEGFQ99075 208 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 ITPAQ9BY32 194 aa18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 PSMC3IPQ9P2W1 217 aaPredicted RBP18.64■□□□□ 0.57
PDLIM4-206ENST00000474421 UTS2RQ9UKP6 389 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms