RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CCDC116Q8IYX3 515 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 SIMC1Q8NDZ2 872 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 FAM76AQ8TAV0 307 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 CAVIN3Q969G5 261 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 APOPT1Q96IL0 206 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 DMRTA2Q96SC8 542 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 TRMOQ9BU70 441 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 GATA5Q9BWX5 397 aaPredicted RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 EBPLQ9BY08 206 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 NXF5Q9H1B4 397 aaKnown RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 PROK2Q9HC23 129 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 ZFP64Q9NPA5 681 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 RRAGDQ9NQL2 400 aaPredicted RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 PFDN4Q9NQP4 134 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 EHD3Q9NZN3 535 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 CNOT11Q9UKZ1 510 aaKnown RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 BOKQ9UMX3 212 aaPredicted RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 ENTPD4Q9Y227 616 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 CFL2Q9Y281 166 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 HRH3Q9Y5N1 445 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 KLF2Q9Y5W3 355 aaPredicted RBP10.29□□□□□ -0.76
CKS1B-206ENST00000474215 CROCCQ5TZA2 2017 aa10.29□□□□□ -0.76
CKS1B-206ENST00000474215 A0A1B0GVC2 190 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 ATP6AP2A0A1C7CYW4 349 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 OR14I1A6ND48 311 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 PRSS44E7EML9 344 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 SUSD5O60279 629 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 ATP6AP2O75787 350 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 BCAS2O75934 225 aaPredicted RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 CBX7O95931 251 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 CELA3AP09093 270 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 PCSK2P16519 638 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 NAGAP17050 411 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 DRD5P21918 477 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 ABCD3P28288 659 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 MPIP34949 423 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 PPICP45877 212 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 FBXW4P57775 412 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 C2orf80Q0P641 193 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 DUSP8Q13202 625 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 RPS6KA2Q15349 733 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 LTB4RQ15722 352 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 GXYLT1Q4G148 440 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 EMC4Q5J8M3 183 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 TBCELQ5QJ74 424 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 CLEC6AQ6EIG7 209 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 NOXRED1Q6NXP6 359 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 TRILQ7L0X0 811 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 CD163Q86VB7 1156 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 OR52R1Q8NGF1 315 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.28□□□□□ -0.765e-12■□□□□ 8.1
CKS1B-206ENST00000474215 ZNF675Q8TD23 568 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 PHF10Q8WUB8 498 aaKnown RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 DIO2Q92813 273 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 EXOSC8Q96B26 276 aaKnown RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 ERP27Q96DN0 273 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 HSPBAP1Q96EW2 488 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 METTL2AQ96IZ6 378 aaKnown RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 LCORQ96JN0 433 aaPredicted RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 SECISBP2Q96T21 854 aaKnown RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 DOHHQ9BU89 302 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 TMEM109Q9BVC6 243 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 ANGPTL4Q9BY76 406 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 TP63Q9H3D4 680 aaPredicted RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 SLC35C2Q9NQQ7 365 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 GIMAP4Q9NUV9 329 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 PRODH2Q9UF12 536 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 DTX4Q9Y2E6 619 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 WBP11Q9Y2W2 641 aaKnown RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 CCL27Q9Y4X3 112 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 V9GYY5 206 aaPredicted RBP10.28□□□□□ -0.76
CKS1B-206ENST00000474215 TEX15Q9BXT5 2789 aa10.28□□□□□ -0.76
CKS1B-206ENST00000474215 NAV2Q8IVL1 2488 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 LRRC3CA6NJW4 275 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 NPIPA2E9PIF3 369 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 NPIPA3F8WFD2 350 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 SLC28A1O00337 649 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 BCKDKO14874 412 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 AZIN1O14977 448 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ACOX3O15254 700 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 HCN1O60741 890 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 TRIM3O75382 744 aaPredicted RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 SEC22BO75396 215 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 RSL1D1O76021 490 aaKnown RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 SNX4O95219 450 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 LRATO95237 230 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ABCB1P08183 1280 aaPredicted RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 RFPL3SP0C7P2 107 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 DDCP20711 480 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 HTR1EP28566 365 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ALDH3A1P30838 453 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 MAN2A2P49641 1150 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 EMDP50402 254 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 DCAF7P61962 342 aa10.27□□□□□ -0.77
CKS1B-206ENST00000474215 RPP38P78345 283 aaKnown RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 MRPS35P82673 323 aaKnown RBP10.27□□□□□ -0.77
CKS1B-206ENST00000474215 ZNF763Q0D2J5 394 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms