RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 IGKV3-15P01624 115 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 IGHV3-9P01782 118 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 UMPSP11172 480 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 SAA4P35542 130 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 COPB2P35606 906 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 NPY2RP49146 381 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 RPL34P49207 117 aaKnown RBP4.23□□□□□ -1.73
CLK1-209ENST00000472679 ARHGDIAP52565 204 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 SLC7A2P52569 658 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 HAND2P61296 217 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 UBXN1Q04323 297 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 AP1B1Q10567 949 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 ZKSCAN8Q15776 578 aaPredicted RBP4.23□□□□□ -1.73
CLK1-209ENST00000472679 TAF3Q5VWG9 929 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 BAIAP2L2Q6UXY1 529 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 ZNF584Q8IVC4 421 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 TMEM185AQ8NFB2 350 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 MRAPQ8TCY5 172 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 PIWIL1Q96J94 861 aaKnown RBP4.23□□□□□ -1.73
CLK1-209ENST00000472679 DEFB118Q96PH6 123 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 CPXM1Q96SM3 734 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 TEX13AQ9BXU3 409 aaPredicted RBP4.23□□□□□ -1.73
CLK1-209ENST00000472679 NLNQ9BYT8 704 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 ENTPD4Q9Y227 616 aa4.23□□□□□ -1.73
CLK1-209ENST00000472679 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 A0A0U1RRA0 63 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 TMEM89A2RUT3 159 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 CYB561D2O14569 222 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 NOVP48745 357 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 VCPP55072 806 aaKnown RBP4.22□□□□□ -1.73
CLK1-209ENST00000472679 CBX3Q13185 183 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 CD226Q15762 336 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 PPP1R3AQ16821 1122 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 ZNF528Q3MIS6 628 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 RNF212Q495C1 297 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 ADAMTSL2Q86TH1 951 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 ARL14Q8N4G2 192 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 GTSF1Q8WW33 167 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 EEF2KMTQ96G04 330 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 C19orf43Q9BQ61 176 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 HPS4Q9NQG7 708 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 ABCD2Q9UBJ2 740 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 FETUBQ9UGM5 382 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 VSIG4Q9Y279 399 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 ZNF175Q9Y473 711 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 KLF2Q9Y5W3 355 aaPredicted RBP4.22□□□□□ -1.73
CLK1-209ENST00000472679 SYNJ2O15056 1496 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 RAD54L2Q9Y4B4 1467 aa4.22□□□□□ -1.73
CLK1-209ENST00000472679 TRABD2BA6NFA1 517 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 RANBP6O60518 1105 aaKnown RBP4.21□□□□□ -1.74
CLK1-209ENST00000472679 HSF2BPO75031 334 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 TSC22D2O75157 780 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 APRTP07741 180 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 GIG44P09565 113 aaPredicted RBP4.21□□□□□ -1.74
CLK1-209ENST00000472679 HLA-DPA1P20036 260 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 RAG2P55895 527 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 ZNF85Q03923 595 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 C1orf186Q6ZWK4 172 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 ADGRD2Q7Z7M1 963 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 PYROXD2Q8N2H3 581 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 NEK11Q8NG66 645 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 OR52E1Q8NGJ3 308 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 URGCPQ8TCY9 931 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 TMEM37Q8WXS4 190 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 ATP6V0A1Q93050 837 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 TMEM45BQ96B21 275 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 FAM173AQ9BQD7 235 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 STARD5Q9NSY2 213 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 TRIM10Q9UDY6 481 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 MIOXQ9UGB7 285 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 CIDEBQ9UHD4 219 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 RSPH14Q9UHP6 348 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 SLC9A8Q9Y2E8 581 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 ZMYM6O95789 1325 aa4.21□□□□□ -1.74
CLK1-209ENST00000472679 TRBV2A0A0J9YWF9 115 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 ARPC1BO15143 372 aaKnown RBP4.2□□□□□ -1.74
CLK1-209ENST00000472679 NUDT14O95848 222 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 WNT2P09544 360 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 FASP25445 335 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 ZNF33BQ06732 778 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 HERC4Q5GLZ8 1057 aaPredicted RBP4.2□□□□□ -1.74
CLK1-209ENST00000472679 MS4A13Q5J8X5 152 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 LIPKQ5VXJ0 399 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 MFSD7Q6UXD7 560 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 STOX1Q6ZVD7 989 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 YRDCQ86U90 279 aaKnown RBP4.2□□□□□ -1.74
CLK1-209ENST00000472679 CHCHD4Q8N4Q1 142 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 CCNYQ8ND76 341 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 OR4F17Q8NGA8 305 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 EXOC6Q8TAG9 804 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 PPP1R16AQ96I34 528 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 OR4F4Q96R69 305 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 DDX47Q9H0S4 455 aaKnown RBP4.2□□□□□ -1.74
CLK1-209ENST00000472679 SIRPDQ9H106 197 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 ESM1Q9NQ30 184 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.2□□□□□ -1.74
CLK1-209ENST00000472679 TNFRSF19Q9NS68 423 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 LHX3Q9UBR4 397 aa4.2□□□□□ -1.74
CLK1-209ENST00000472679 PRODH2Q9UF12 536 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms