RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TIMM22Q9Y584 194 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 PCDHA9Q9Y5H5 950 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 SPACA6W5XKT8 324 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 MPDZO75970 2070 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 A0A1W2PPM1 405 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 ACOT7O00154 380 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 UBFD1O14562 309 aaKnown RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 BCKDKO14874 412 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 DIAPH2O60879 1101 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 UGT2B11O75310 529 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 RBP1P09455 135 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 COX7A2P14406 83 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 PORP16435 677 aaPredicted RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 BMP7P18075 431 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 NT5EP21589 574 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 TCEA1P23193 301 aaKnown RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 PIK3R1P27986 724 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 ABCD3P28288 659 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 SERPINB3P29508 390 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 SERPINB1P30740 379 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 HPDP32754 393 aaPredicted RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 BUD31P41223 144 aaPredicted RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 ZFP36L2P47974 494 aaKnown RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 EMDP50402 254 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 CORO7P57737 925 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 HMGCS1Q01581 520 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 CRYZQ08257 329 aaKnown RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 FOXF2Q12947 444 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 TTC19Q6DKK2 380 aaPredicted RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 OR5M10Q6IEU7 315 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 OR52E8Q6IFG1 317 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 SLC48A1Q6P1K1 146 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 RGS9BPQ6ZS82 235 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 ACAD11Q709F0 780 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 SLC29A4Q7RTT9 530 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 WDR53Q7Z5U6 358 aaPredicted RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 NUDT13Q86X67 352 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 RELL1Q8IUW5 271 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 GALNT12Q8IXK2 581 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 GSPT2Q8IYD1 628 aaKnown RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 CCDC116Q8IYX3 515 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 CDYL2Q8N8U2 506 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 WDSUB1Q8N9V3 476 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 LINC01560Q8TB33 94 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 RDH11Q8TC12 318 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 SLC22A8Q8TCC7 542 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 CHTF18Q8WVB6 975 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 APIPQ96GX9 242 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 WDYHV1Q96HA8 205 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 TMEM237Q96Q45 408 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 DOHHQ9BU89 302 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 G6PC3Q9BUM1 346 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 UGT2B28Q9BY64 529 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 RTN4RQ9BZR6 473 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 BRINP2Q9C0B6 783 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 RUBCNLQ9H714 662 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 ACKR4Q9NPB9 350 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 SERHLQ9NQF3 203 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 FLRT3Q9NZU0 649 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 CRIM1Q9NZV1 1036 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 EMCNQ9ULC0 261 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 PLLPQ9Y342 182 aa7.38□□□□□ -1.23
USP48-207ENST00000471752 TNPO3Q9Y5L0 923 aaKnown RBP7.38□□□□□ -1.23
USP48-207ENST00000471752 C15orf38-AP3S2A0A0A6YYH1 394 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 A0A1W2PPR1 153 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 CCDC189A1A4V9 331 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 OR14I1A6ND48 311 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 STX16-NPEPL1H3BU86 382 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 STX16O14662 325 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 UGDHO60701 494 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 HCN1O60741 890 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 ICOSLGO75144 302 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 HPNP05981 417 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 INHBAP08476 426 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 IL3P08700 152 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 BMP5P22003 454 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 GDF1P27539 372 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 PTPN6P29350 595 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 DNAJA1P31689 397 aaKnown RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 CEACAM8P31997 349 aaPredicted RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 ALDH9A1P49189 494 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 CDK9P50750 372 aaKnown RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 ZNF136P52737 540 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 MAPK12P53778 367 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 IST1P53990 364 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 CLCQ05315 142 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 BTKQ06187 659 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 MAP4K2Q12851 820 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 ILF2Q12905 390 aaKnown RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 IFT88Q13099 833 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 RPS6KA2Q15349 733 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 ACSF3Q4G176 576 aaPredicted RBP7.37□□□□□ -1.23
USP48-207ENST00000471752 ZNF678Q5SXM1 525 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 VASNQ6EMK4 673 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 PAOXQ6QHF9 649 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 NPSR1Q6W5P4 371 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 SH2D5Q6ZV89 423 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 SLC15A4Q8N697 577 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 C9orf106Q8NAJ2 232 aa7.37□□□□□ -1.23
USP48-207ENST00000471752 OR52R1Q8NGF1 315 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms