RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 VASNQ6EMK4 673 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 OR52E8Q6IFG1 317 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 GRHL2Q6ISB3 625 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 CYP20A1Q6UW02 462 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 NUDT13Q86X67 352 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 GAS2L3Q86XJ1 694 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 MYLK4Q86YV6 388 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 P3H2Q8IVL5 708 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 GALNT12Q8IXK2 581 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 FBXO36Q8NEA4 188 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 C17orf47Q8NEP4 570 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 OR7G3Q8NG95 312 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 STAG3L4Q8TBR4 150 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 SPPL2AQ8TCT8 520 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 UBTD2Q8WUN7 234 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 EXT2Q93063 718 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 UCN3Q969E3 161 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 ABTB1Q969K4 478 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 PPWD1Q96BP3 646 aaKnown RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 TMEM41AQ96HV5 264 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 TM9SF2Q99805 663 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 CPNE1Q99829 537 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 RBM24Q9BX46 236 aaKnown RBP8.34□□□□□ -1.07
CPSF4-211ENST00000471455 UBQLN3Q9H347 655 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 PIGMQ9H3S5 423 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 PLEKHF2Q9H8W4 249 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 PROK2Q9HC23 129 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 NDRG3Q9UGV2 375 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 SNX12Q9UMY4 172 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 TRIM33Q9UPN9 1127 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 TSC22D4Q9Y3Q8 395 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 ANGPTL3Q9Y5C1 460 aa8.34□□□□□ -1.07
CPSF4-211ENST00000471455 NINQ8N4C6 2090 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SH3D21A4FU49 640 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SYCE1LA8MT33 242 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SUPT3HB4E1H0 165 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 H0Y3Z8 333 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SAP18O00422 153 aaKnown RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 PHGDHO43175 533 aaKnown RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 PRAMEF4O60810 478 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SMPD2O60906 423 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SH3BGRLO75368 114 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SUPT3HO75486 399 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SEC31AO94979 1220 aaKnown RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 LRATO95237 230 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 WISP3O95389 354 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 HRGP04196 525 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SLC35E2BP0CK96 405 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 SLC35E2P0CK97 266 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 PTX3P26022 381 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 IVDP26440 423 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 GP5P40197 560 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 PIK3CGP48736 1102 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 RAB10P61026 200 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 GAB1Q13480 694 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 OR4D1Q15615 310 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 FBXO48Q5FWF7 155 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 PRAMEF9Q5VWM5 478 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 ENPP6Q6UWR7 440 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 TBC1D1Q86TI0 1168 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 ZBED8Q8IZ13 594 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 LRRC75A-AS1Q8N1F1 130 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 OR7G1Q8NGA0 311 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 OR1J4Q8NGS1 313 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 HUS1BQ8NHY5 278 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 LINC01560Q8TB33 94 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 ZPLD1Q8TCW7 415 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 PIGTQ969N2 578 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 GPR22Q99680 433 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 PIP5K1AQ99755 562 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 WDR83Q9BRX9 315 aaKnown RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 UGT2B28Q9BY64 529 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 ANGPTL4Q9BY76 406 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 EPB41L4BQ9H329 900 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 OR51B5Q9H339 312 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 METTL7AQ9H8H3 244 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 ACTR8Q9H981 624 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 NMRAL1Q9HBL8 299 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 TEX10Q9NXF1 929 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 JKAMPQ9P055 326 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 FETUBQ9UGM5 382 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 CFL2Q9Y281 166 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 NPFFR2Q9Y5X5 522 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 HIVEP2P31629 2446 aa8.33□□□□□ -1.08
CPSF4-211ENST00000471455 ZNF469Q96JG9 3925 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-211ENST00000471455 CCDC189A1A4V9 331 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 E7ESA3 106 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 HRKO00198 91 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 PLPP1O14494 284 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 ZSCAN12O43309 604 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 UGDHO60701 494 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 KERAO60938 352 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 ACSL3O95573 720 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 RHOXF2BP0C7M4 288 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 FAM58BPP0C7Q3 252 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 NAGAP17050 411 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 BMP7P18075 431 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 EPORP19235 508 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 CD53P19397 219 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms