RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 PGRMC2O15173 223 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 ABCB1P08183 1280 aaPredicted RBP18.89■□□□□ 0.61
CPSF7-209ENST00000463244 MTHFD2P13995 350 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 CPN1P15169 458 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 PIK3R1P27986 724 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 SPRP35270 261 aaPredicted RBP18.89■□□□□ 0.61
CPSF7-209ENST00000463244 TMEM81Q6P7N7 255 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 ANGPTL8Q6UXH0 198 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 RAPH1Q70E73 1250 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 ADGRE4PQ86SQ3 457 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 LUZP2Q86TE4 346 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 NUDT13Q86X67 352 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 SLC44A1Q8WWI5 657 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 REPS1Q96D71 796 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 TUBA1CQ9BQE3 449 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 ZNF395Q9H8N7 513 aaPredicted RBP18.89■□□□□ 0.61
CPSF7-209ENST00000463244 ACTR8Q9H981 624 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 PSD3Q9NYI0 1048 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 ANGPTL3Q9Y5C1 460 aa18.89■□□□□ 0.61
CPSF7-209ENST00000463244 UGDHO60701 494 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 PPM1BO75688 479 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 RCBTB2O95199 551 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 GBAP04062 536 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 LTA4HP09960 611 aaKnown RBP18.88■□□□□ 0.61
CPSF7-209ENST00000463244 GPX3P22352 226 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 CPA2P48052 419 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 GRTP1Q5TC63 336 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 TBC1D1Q86TI0 1168 aaPredicted RBP18.88■□□□□ 0.61
CPSF7-209ENST00000463244 OR7G1Q8NGA0 311 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 UCN2Q96RP3 112 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 TM9SF2Q99805 663 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 NXF5Q9H1B4 397 aaKnown RBP18.88■□□□□ 0.61
CPSF7-209ENST00000463244 METTL7AQ9H8H3 244 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 SAYSD1Q9NPB0 183 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 DTX4Q9Y2E6 619 aa18.88■□□□□ 0.61
CPSF7-209ENST00000463244 CCDC188H7C350 402 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 SNPHO15079 494 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 ARHGEF9O43307 516 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 ZSCAN12O43309 604 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 LY6G6DO95868 133 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 ROS1P08922 2347 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 NAGAP17050 411 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 KRT15P19012 456 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 S1PR1P21453 382 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 GCKP35557 465 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 SLMAPQ14BN4 828 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 CPSF6Q16630 551 aaKnown RBP eCLIP18.87■□□□□ 0.61
CPSF7-209ENST00000463244 Q5PR19 223 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 C3orf62Q6ZUJ4 267 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 WDR20Q8TBZ3 569 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 COX4I2Q96KJ9 171 aa18.87■□□□□ 0.61
CPSF7-209ENST00000463244 SYCE1LA8MT33 242 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 H0Y3Z8 333 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 FOXE1O00358 373 aaPredicted RBP18.86■□□□□ 0.61
CPSF7-209ENST00000463244 EIF3HO15372 352 aaKnown RBP eCLIP18.86■□□□□ 0.61
CPSF7-209ENST00000463244 RHOXF2BP0C7M4 288 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 CPMP14384 443 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 CRABP2P29373 138 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 PTGDSP41222 190 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 XKP51811 444 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 NEK2P51955 445 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 C6orf163Q5TEZ5 329 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 DESI1Q6ICB0 168 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 SLC30A6Q6NXT4 461 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 CTAGE3PQ8IX95 158 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 LRRC75A-AS1Q8N1F1 130 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 VWA5B2Q8N398 1253 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 OR4K14Q8NGD5 310 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 RHEBL1Q8TAI7 183 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 ZNF592Q92610 1267 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 WNT2BQ93097 391 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 HGDQ93099 445 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 INTS12Q96CB8 462 aaKnown RBP18.86■□□□□ 0.61
CPSF7-209ENST00000463244 NXNL1Q96CM4 212 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 G6PC3Q9BUM1 346 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 OSBPL11Q9BXB4 747 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 OR2B2Q9GZK3 357 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 PIGMQ9H3S5 423 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 GALNT9Q9HCQ5 603 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 CLCF1Q9UBD9 225 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 EIF3LQ9Y262 564 aaKnown RBP18.86■□□□□ 0.61
CPSF7-209ENST00000463244 RTTNQ86VV8 2226 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 STAB1Q9NY15 2570 aa18.86■□□□□ 0.61
CPSF7-209ENST00000463244 CASKO14936 926 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 ICOSLGO75144 302 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 SEMA3DO95025 777 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 NT5EP21589 574 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 GPX6P59796 221 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 SRYQ05066 204 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 SNTA1Q13424 505 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 NNATQ16517 81 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 PFKFB4Q16877 469 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 KBTBD12Q3ZCT8 623 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 ENPP6Q6UWR7 440 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 PLXDC2Q6UX71 529 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 NUP54Q7Z3B4 507 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 PRIMA1Q86XR5 153 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 P3H2Q8IVL5 708 aa18.85■□□□□ 0.61
CPSF7-209ENST00000463244 CENPLQ8N0S6 344 aaPredicted RBP18.85■□□□□ 0.61
CPSF7-209ENST00000463244 L3MBTL4Q8NA19 623 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms