RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CARD9Q9H257 536 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 MCCC2Q9HCC0 563 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 SEPT11Q9NVA2 429 aaKnown RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 SLC23A2Q9UGH3 650 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 SNX7Q9UNH6 387 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 BTRCQ9Y297 605 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 RPH3AQ9Y2J0 694 aaPredicted RBP4.51□□□□□ -1.69
COPS3-204ENST00000462236 MAU2Q9Y6X3 613 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 PRR14LQ5THK1 2151 aa4.51□□□□□ -1.69
COPS3-204ENST00000462236 NINQ8N4C6 2090 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 A0A0U1RQJ8 604 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 TLCD2A6NGC4 264 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 ARHGAP42A6NI28 874 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 HSPA12AO43301 675 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 GRID2O43424 1007 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 HNRNPCL1O60812 293 aaKnown RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 SCRG1O75711 98 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 PALMO75781 387 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 GNA14O95837 355 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 ATP1A1P05023 1023 aaKnown RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 CD99P14209 185 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CYP11B1P15538 503 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 TMEM11P17152 192 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 AMD1P17707 334 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 SDC4P31431 198 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 ARRB2P32121 409 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 PPARGP37231 505 aaPredicted RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 HADHAP40939 763 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CA7P43166 264 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 AIF1P55008 147 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 F2RL1P55085 397 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 SORDQ00796 357 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 IL10RBQ08334 325 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 RAPSNQ13702 412 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 NCF4Q15080 339 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 MED22Q15528 200 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CDO1Q16878 200 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 PCGF3Q3KNV8 242 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 LRRC66Q68CR7 880 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CFAP161Q6P656 301 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 KLHL35Q6PF15 583 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 XKRXQ6PP77 449 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 QSOX2Q6ZRP7 698 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 FAM92BQ6ZTR7 304 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CYP4V2Q6ZWL3 525 aaPredicted RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 SLFN11Q7Z7L1 901 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 PHLDB2Q86SQ0 1253 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 RAB43Q86YS6 212 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 TGIF2LYQ8IUE0 185 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 ZNF547Q8IVP9 402 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 NPWQ8N729 165 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 FAM172AQ8WUF8 416 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 MR1Q95460 341 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CMTM3Q96MX0 182 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 ZNF599Q96NL3 588 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 SMIM14Q96QK8 99 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 NUDCD1Q96RS6 583 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 C1QTNF5Q9BXJ0 243 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 ESRP2Q9H6T0 727 aaKnown RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 HINT3Q9NQE9 182 aaKnown RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 FAM207AQ9NSI2 230 aaPredicted RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 RMND1Q9NWS8 449 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 ATXN10Q9UBB4 475 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CD84Q9UIB8 345 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 CORO1CQ9ULV4 474 aaPredicted RBP4.5□□□□□ -1.69
COPS3-204ENST00000462236 MYO6Q9UM54 1294 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 PTGDR2Q9Y5Y4 395 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 SESN1Q9Y6P5 492 aa4.5□□□□□ -1.69
COPS3-204ENST00000462236 USF3Q68DE3 2245 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 A0A0J9YYE9 177 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 DYTNA2CJ06 578 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 GOLGA6L9A6NEM1 432 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 GPR89AB7ZAQ6 455 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 GOLGA8SH3BPF8 625 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 AP3D1O14617 1153 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 PSMA7O14818 248 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 VEGFDO43915 354 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 DOK2O60496 412 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 JRKO75564 520 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 SERPINI2O75830 405 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 TSPAN9O75954 239 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 TRBC1P01850 177 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 IGHEP01854 428 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 ALPPP05187 535 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 KLK3P07288 261 aaPredicted RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 GPR89BP0CG08 455 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 HSPA9P38646 679 aaKnown RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 USP8P40818 1118 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 KCNK10P57789 538 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 PDE1BQ01064 536 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 CRYZQ08257 329 aaKnown RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 SLC10A7Q0GE19 358 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 EXOC3L4Q17RC7 722 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 C2orf68Q2NKX9 166 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 ZNF260Q3ZCT1 412 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 VWA2Q5GFL6 755 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 FAM205BPQ63HN1 556 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 IRGCQ6NXR0 463 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 WDR59Q6PJI9 974 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 GBP6Q6ZN66 633 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms