RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 CNRIP1Q96F85 164 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-210ENST00000462125 APIPQ96GX9 242 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 SECISBP2Q96T21 854 aaKnown RBP12.16□□□□□ -0.46
C9orf3-210ENST00000462125 TP63Q9H3D4 680 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-210ENST00000462125 ZFP64Q9NPA5 681 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 MAT2BQ9NZL9 334 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 HEY2Q9UBP5 337 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 CFL2Q9Y281 166 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 TIMM22Q9Y584 194 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 PCNX1Q96RV3 2341 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 AQP7O14520 342 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 CDH16O75309 829 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 ERAL1O75616 437 aaKnown RBP12.15□□□□□ -0.46
C9orf3-210ENST00000462125 CLDN14O95500 239 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 CPA3P15088 417 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 NAGAP17050 411 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 KRT15P19012 456 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 GSTM5P46439 218 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 NAGLUP54802 743 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 FOXA1P55317 472 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 HMGCS1Q01581 520 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 DUSP2Q05923 314 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 CEBPEQ15744 281 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 SPIN4Q56A73 249 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 TTMPQ5BVD1 217 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 HLA-DQA1Q5Y7H0 255 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 TMEM211Q6ICI0 200 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 FAM111BQ6SJ93 734 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 C3P1Q6ZMU1 363 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 NCCRP1Q6ZVX7 275 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-210ENST00000462125 TRIM46Q7Z4K8 759 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 CD163Q86VB7 1156 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 LRRC25Q8N386 305 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-210ENST00000462125 VWA5B2Q8N398 1253 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 CCNYL1Q8N7R7 359 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 KCNA7Q96RP8 456 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 RUBCNLQ9H714 662 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 MID1IP1Q9NPA3 183 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 ACKR4Q9NPB9 350 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 OXSMQ9NWU1 459 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 QPCTLQ9NXS2 382 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 DLGAP4Q9Y2H0 992 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 ZNF780BQ9Y6R6 833 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 EML6Q6ZMW3 1958 aa12.15□□□□□ -0.46
C9orf3-210ENST00000462125 NPIPA2E9PIF3 369 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 NPIPA3F8WFD2 350 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 TP53I11O14683 189 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 BCKDKO14874 412 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 PCDH7O60245 1069 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 HCN1O60741 890 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 TRIM3O75382 744 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-210ENST00000462125 SNX4O95219 450 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 CBX7O95931 251 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 CELA3AP09093 270 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 RFPL3SP0C7P2 107 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 KRT4P19013 534 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 DRD5P21918 477 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 GPX3P22352 226 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 NRG3P56975 720 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 KCNJ2P63252 427 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 ACSM2AQ08AH3 577 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 DUSP8Q13202 625 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 TRMT12Q53H54 448 aaKnown RBP12.14□□□□□ -0.47
C9orf3-210ENST00000462125 C6orf163Q5TEZ5 329 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 ACSM2BQ68CK6 577 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 TMEM64Q6YI46 380 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 FRMD7Q6ZUT3 714 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 SAMD14Q8IZD0 417 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-210ENST00000462125 MARVELD2Q8N4S9 558 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 FAM13CQ8NE31 585 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.14□□□□□ -0.47
C9orf3-210ENST00000462125 SPPL2AQ8TCT8 520 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 EPS8L3Q8TE67 593 aaKnown RBP12.14□□□□□ -0.47
C9orf3-210ENST00000462125 C16orf78Q8WTQ4 265 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 ARL8AQ96BM9 186 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 KLHL29Q96CT2 875 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 ERP27Q96DN0 273 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 ANGPTL4Q9BY76 406 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 ZNF703Q9H7S9 590 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-210ENST00000462125 EHD3Q9NZN3 535 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 UTS2RQ9UKP6 389 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 BOKQ9UMX3 212 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-210ENST00000462125 LIPGQ9Y5X9 500 aa12.14□□□□□ -0.47
C9orf3-210ENST00000462125 ZNF407Q9C0G0 2248 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 ATP6AP2A0A1C7CYW4 349 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 LRRC3CA6NJW4 275 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 COPEO14579 308 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 RGS16O15492 202 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-210ENST00000462125 ATP6AP2O75787 350 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 IL3P08700 152 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 PRF1P14222 555 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 ABCD3P28288 659 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 TIA1P31483 386 aaKnown RBP eCLIP12.13□□□□□ -0.47
C9orf3-210ENST00000462125 PPICP45877 212 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
C9orf3-210ENST00000462125 TMED10P49755 219 aaKnown RBP12.13□□□□□ -0.47
C9orf3-210ENST00000462125 EMDP50402 254 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms