RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 ZFP41Q8N8Y5 198 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 DOK4Q8TEW6 326 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 DNAJA4Q8WW22 397 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-205ENST00000460170 NSMAFQ92636 917 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 TCEAL4Q96EI5 215 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 FAM46AQ96IP4 442 aaKnown RBP14.03□□□□□ -0.16
PTPRU-205ENST00000460170 PTCHD1Q96NR3 888 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 HS3ST2Q9Y278 367 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 NPIPA5E9PKD4 350 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 SEMA3DO95025 777 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 SLC5A2P31639 672 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 ARHGAP19Q14CB8 494 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 ODF4Q2M2E3 257 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 ZNF691Q5VV52 312 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 NDNFQ8TB73 568 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 THRSPQ92748 146 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 SLC6A16Q9GZN6 736 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 TMEM30AQ9NV96 361 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 UCKL1Q9NWZ5 548 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 CD300AQ9UGN4 299 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 SERTAD3Q9UJW9 196 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 NPIPA1Q9UND3 350 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 GPR34Q9UPC5 381 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 HSPB11Q9Y547 144 aa14.03□□□□□ -0.16
PTPRU-205ENST00000460170 EMX1Q04741 257 aaPredicted RBP14.02□□□□□ -0.16
PTPRU-205ENST00000460170 TSACCQ96A04 125 aaPredicted RBP14.02□□□□□ -0.16
PTPRU-205ENST00000460170 SLC22A12Q96S37 553 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 SORBS1Q9BX66 1292 aaKnown RBP14.02□□□□□ -0.16
PTPRU-205ENST00000460170 HDHD5Q9BXW7 423 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 ANKMY1Q9P2S6 941 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 OR14I1A6ND48 311 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 C1orf105O95561 183 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 CD40LGP29965 261 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 CBX5P45973 191 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 OR3A3P47888 321 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 OR3A2P47893 321 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 C1orf61Q13536 156 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 FIGLAQ6QHK4 219 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 NRMQ8IXM6 262 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 OR2L5Q8NG80 312 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 CCDC32Q9BV29 185 aa14.02□□□□□ -0.16
PTPRU-205ENST00000460170 A8MV72 311 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-205ENST00000460170 IFNA7P01567 189 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 GPR143P51810 404 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 SWI5Q1ZZU3 235 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.02□□□□□ -0.17
PTPRU-205ENST00000460170 METTL27Q8N6F8 245 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-205ENST00000460170 GATSQ8NAP1 163 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 GPR52Q9Y2T5 361 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.17
PTPRU-205ENST00000460170 TCRBV21S2A2A0A5A6 115 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 PLD2O14939 933 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 CRYZQ08257 329 aaKnown RBP14.02□□□□□ -0.17
PTPRU-205ENST00000460170 ELOCQ15369 112 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 NNATQ16517 81 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 PNCKQ6P2M8 343 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 OR2L2Q8NH16 312 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 SEC61A2Q9H9S3 476 aa14.02□□□□□ -0.17
PTPRU-205ENST00000460170 EVPLQ92817 2033 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 ATE1O95260 518 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 IL1RNP18510 177 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 NAA10P41227 235 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-205ENST00000460170 HSD17B12Q53GQ0 312 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 PLAG1Q6DJT9 500 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 DUS1LQ6P1R4 473 aaKnown RBP14.01□□□□□ -0.17
PTPRU-205ENST00000460170 GDPGP1Q6ZNW5 385 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 ARMC10Q8N2F6 343 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 RASGEF1AQ8N9B8 481 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 C7orf57Q8NEG2 295 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 OR6N2Q8NGY6 317 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 UBTD2Q8WUN7 234 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF69Q9UC07 566 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 GXYLT2A0PJZ3 443 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 METTL21EPA6NDL7 271 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 CD8B2A6NJW9 211 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 CD8BP10966 210 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 CEBPBP17676 345 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 ARFRP1Q13795 201 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 CCDC115Q96NT0 180 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 KLRF1Q9NZS2 232 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 CYP8B1Q9UNU6 501 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 RREB1Q92766 1687 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 GON4LQ3T8J9 2241 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 A0A1W2PRG6 482 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 HYKKA2RU49 373 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 ANTXRLA6NF34 631 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 H3BSH0 61 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 SOX2P48431 317 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 ARRB1P49407 418 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-205ENST00000460170 SPATC1Q76KD6 591 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 TRIM46Q7Z4K8 759 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 PAQR7Q86WK9 346 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 PTRH1Q86Y79 214 aaKnown RBP14.01□□□□□ -0.17
PTPRU-205ENST00000460170 CST11Q9H112 138 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 TUBB1Q9H4B7 451 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 OLAHQ9NV23 265 aa14.01□□□□□ -0.17
PTPRU-205ENST00000460170 TRAV6A0A075B6T7 132 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms