RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SDCCAG3Q96C92 435 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 CTHRC1Q96CG8 243 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 CNRIP1Q96F85 164 aaPredicted RBP16.43■□□□□ 0.22
MSH6-207ENST00000456246 EHD3Q9NZN3 535 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 ZNF639Q9UID6 485 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 DLGAP4Q9Y2H0 992 aa16.43■□□□□ 0.22
MSH6-207ENST00000456246 MYO9AB2RTY4 2548 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 TRGV5A0A0B4J1U4 118 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 ATP6AP2A0A1C7CYW4 349 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 NPIPA2E9PIF3 369 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 NPIPA3F8WFD2 350 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 CRCPO75575 148 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 ATP6AP2O75787 350 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 IL3P08700 152 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 HOXD4P09016 255 aaPredicted RBP16.42■□□□□ 0.22
MSH6-207ENST00000456246 CHN1P15882 459 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 S1PR1P21453 382 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 ABCD3P28288 659 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 HMGCS1Q01581 520 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 IMPG1Q17R60 797 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 GXYLT1Q4G148 440 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 TMEM198Q66K66 360 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 MMP21Q8N119 569 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 SPPL2AQ8TCT8 520 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 RND1Q92730 232 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 HSPBAP1Q96EW2 488 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 C11orf24Q96F05 449 aaPredicted RBP16.42■□□□□ 0.22
MSH6-207ENST00000456246 METTL2AQ96IZ6 378 aaKnown RBP16.42■□□□□ 0.22
MSH6-207ENST00000456246 ZNF681Q96N22 645 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 EXO5Q9H790 373 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 ACKR4Q9NPB9 350 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 PFDN4Q9NQP4 134 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 BCAP29Q9UHQ4 241 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 WBP11Q9Y2W2 641 aaKnown RBP16.42■□□□□ 0.22
MSH6-207ENST00000456246 TIMM22Q9Y584 194 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 PCDHGB3Q9Y5G1 929 aa16.42■□□□□ 0.22
MSH6-207ENST00000456246 LRRC3CA6NJW4 275 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 SMIM23A6NLE4 172 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 FAM47E-STBD1D6RA91 191 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 WDR1O75083 606 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 CPA3P15088 417 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 KRT4P19013 534 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 ACVR2AP27037 513 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 CHRNB4P30926 498 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 NAGLUP54802 743 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 RAE1P78406 368 aaKnown RBP16.41■□□□□ 0.22
MSH6-207ENST00000456246 ZNF763Q0D2J5 394 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 MGAT2Q10469 447 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 EMC4Q5J8M3 183 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 WLSQ5T9L3 541 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 TMEM81Q6P7N7 255 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 FAM111BQ6SJ93 734 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 GDF7Q7Z4P5 450 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 OR5M3Q8NGP4 307 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 FAM76AQ8TAV0 307 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 EPS8L3Q8TE67 593 aaKnown RBP16.41■□□□□ 0.22
MSH6-207ENST00000456246 APIPQ96GX9 242 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 LCORQ96JN0 433 aaPredicted RBP16.41■□□□□ 0.22
MSH6-207ENST00000456246 NXF5Q9H1B4 397 aaKnown RBP16.41■□□□□ 0.22
MSH6-207ENST00000456246 PROK2Q9HC23 129 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 RRAGDQ9NQL2 400 aaPredicted RBP16.41■□□□□ 0.22
MSH6-207ENST00000456246 OXSMQ9NWU1 459 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 MKS1Q9NXB0 559 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 HEY2Q9UBP5 337 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 ACAD8Q9UKU7 415 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 LIPGQ9Y5X9 500 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 ABCA12Q86UK0 2595 aa16.41■□□□□ 0.22
MSH6-207ENST00000456246 PHF3Q92576 2039 aaKnown RBP16.4■□□□□ 0.22
MSH6-207ENST00000456246 TRIM3O75382 744 aaPredicted RBP16.4■□□□□ 0.22
MSH6-207ENST00000456246 PPM1BO75688 479 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 CBX7O95931 251 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 ANXA4P09525 319 aaPredicted RBP16.4■□□□□ 0.22
MSH6-207ENST00000456246 GABRA1P14867 456 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 FBXW4P57775 412 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 SLC18A2Q05940 514 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 CEBPEQ15744 281 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 SPDYAQ5MJ70 313 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 LIPMQ5VYY2 423 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 NCCRP1Q6ZVX7 275 aaPredicted RBP16.4■□□□□ 0.22
MSH6-207ENST00000456246 TRIM46Q7Z4K8 759 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 PACS2Q86VP3 889 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 MCEMP1Q8IX19 187 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 LIX1Q8N485 282 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 MARVELD2Q8N4S9 558 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 OR52R1Q8NGF1 315 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 C16orf78Q8WTQ4 265 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 JSRP1Q96MG2 331 aaPredicted RBP16.4■□□□□ 0.22
MSH6-207ENST00000456246 KCNA7Q96RP8 456 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 TRMOQ9BU70 441 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 ANGPTL4Q9BY76 406 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 IQCGQ9H095 443 aaKnown RBP16.4■□□□□ 0.22
MSH6-207ENST00000456246 SLC35C2Q9NQQ7 365 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 PNPLA3Q9NST1 481 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 PLLPQ9Y342 182 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 HRH3Q9Y5N1 445 aa16.4■□□□□ 0.22
MSH6-207ENST00000456246 EXPH5Q8NEV8 1989 aa16.39■□□□□ 0.21
MSH6-207ENST00000456246 UBFD1O14562 309 aaKnown RBP16.39■□□□□ 0.21
MSH6-207ENST00000456246 TO15178 435 aa16.39■□□□□ 0.21
MSH6-207ENST00000456246 RSL1D1O76021 490 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms