RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 S1PR1P21453 382 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 EPHA3P29320 983 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 SOX3P41225 446 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 NR0B1P51843 470 aaKnown RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 MANFP55145 182 aaKnown RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 CLDN8P56748 225 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 NRG3P56975 720 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 MGAT2Q10469 447 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 HSPB3Q12988 150 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 PDE7AQ13946 482 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 INPP5JQ15735 1006 aaPredicted RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 INAQ16352 499 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 MAPKAPK3Q16644 382 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 PRSS53Q2L4Q9 553 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 CPTPQ5TA50 214 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 ZNF468Q5VIY5 522 aaPredicted RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 RPUSD3Q6P087 351 aaKnown RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 FAM180AQ6UWF9 173 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 IL20RBQ6UXL0 311 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 LARP4Q71RC2 724 aaKnown RBP eCLIP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 SPATA19Q7Z5L4 167 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 CISD2Q8N5K1 135 aaKnown RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 NATD1Q8N6N6 113 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 MDS2Q8NDY4 140 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 OR7A2PQ8NGA2 310 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 C16orf52Q8NHV5 167 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 TP53INP1Q96A56 240 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 CIDECQ96AQ7 238 aaPredicted RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 MAGED4Q96JG8 741 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 AMDHD1Q96NU7 426 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 DPY30Q9C005 99 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 TRIM4Q9C037 500 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 GLIPR2Q9H4G4 154 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 WDR55Q9H6Y2 383 aaPredicted RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 TRIM45Q9H8W5 580 aaPredicted RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 SLCO1B3Q9NPD5 702 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 TIMMDC1Q9NPL8 285 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 AGPAT4Q9NRZ5 378 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 TAS2R9Q9NYW1 312 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 PCDHGB6Q9Y5F9 930 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 COPG1Q9Y678 874 aaKnown RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 USH1CQ9Y6N9 552 aa12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 TLN1Q9Y490 2541 aaKnown RBP12.98□□□□□ -0.33
GTF3C3-206ENST00000448539 CAPN14A8MX76 684 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 PLOD3O60568 738 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 DIAPH2O60879 1101 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 NEURL1O76050 574 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 OR6B1O95007 311 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 RASAL1O95294 804 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 WISP1O95388 367 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 CBX7O95931 251 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 DIO3P55073 304 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 DCAF7P61962 342 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 KCNC4Q03721 635 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 RPS6KA2Q15349 733 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 ZNF385BQ569K4 471 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 OGFOD2Q6N063 350 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 FAM47EQ6ZV65 393 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 ACAD11Q709F0 780 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 DND1Q8IYX4 353 aaKnown RBP12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 C17orf47Q8NEP4 570 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 SNRNP40Q96DI7 357 aaKnown RBP12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 SGCZQ96LD1 299 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 CLMPQ9H6B4 373 aa12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 DDX18Q9NVP1 670 aaKnown RBP12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 KLF13Q9Y2Y9 288 aaPredicted RBP12.97□□□□□ -0.33
GTF3C3-206ENST00000448539 CPAMD8Q8IZJ3 1885 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 A0A087WV62 115 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 A0A1W2PRB8 838 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 KLRC4-KLRK1H3BQV0 150 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 PLOD2O00469 737 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 TGDSO95455 350 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 GPX3P22352 226 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 MC3RP41968 323 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 TMED10P49755 219 aaKnown RBP12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 CLNS1AP54105 237 aaKnown RBP12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 PGS1Q32NB8 556 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 RTL4Q6ZR62 310 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 KRTCAP2Q8N6L1 136 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 BCORP1Q8N888 145 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 OR7G2Q8NG99 324 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 CEP70Q8NHQ1 597 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 ACTRT2Q8TDY3 377 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 ADIPOR1Q96A54 375 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 ELP4Q96EB1 424 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 SCMH1Q96GD3 660 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 LCORQ96JN0 433 aaPredicted RBP12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 ITPAQ9BY32 194 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 ANKRA2Q9H9E1 313 aa12.96□□□□□ -0.33
GTF3C3-206ENST00000448539 CNTRLQ7Z7A1 2325 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 ACOX3O15254 700 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 NME2P1O60361 137 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 NADKO95544 446 aaPredicted RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 CRYABP02511 175 aaKnown RBP12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 P04436 131 aa12.95□□□□□ -0.34
GTF3C3-206ENST00000448539 LAMP1P11279 417 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms