RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 FAM92BQ6ZTR7 304 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 C16orf62Q7Z3J2 963 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 B3GNT8Q7Z7M8 397 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 TSPYL5Q86VY4 417 aaPredicted RBP8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SPARTQ8N0X7 666 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 ARL14Q8N4G2 192 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 AQP11Q8NBQ7 271 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SIMC1Q8NDZ2 872 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 OR7G2Q8NG99 324 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 ADAMTS15Q8TE58 950 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SLC9A6Q92581 669 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SHDQ96IW2 340 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 HSPA12BQ96MM6 686 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SLC38A3Q99624 504 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SEMA6CQ9H3T2 930 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 TMEM165Q9HC07 324 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 CTPS2Q9NRF8 586 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 MS4A12Q9NXJ0 267 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 TMCC3Q9ULS5 477 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 CDC14AQ9UNH5 594 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 HCN4Q9Y3Q4 1203 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 GPC6Q9Y625 555 aaPredicted RBP8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SLC22A7Q9Y694 548 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SPACA6W5XKT8 324 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 TRBV4-1A0A0J9YWV2 114 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 FOSL2P15408 326 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 POU1F1P28069 291 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 PCSK6P29122 969 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SLC5A2P31639 672 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SHC2P98077 582 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 FUT5Q11128 374 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 PIN1Q13526 163 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 DEFB133Q30KQ1 61 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 LEXMQ3ZCV2 418 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 ATAD3BQ5T9A4 648 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 RNF44Q7L0R7 432 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 ZNF605Q86T29 641 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 COMTD1Q86VU5 262 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 GKN2Q86XP6 184 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 CCDC71Q8IV32 467 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 AVL9Q8NBF6 648 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 ZNF540Q8NDQ6 660 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 ZG16BQ96DA0 208 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 NODALQ96S42 347 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SPATA5L1Q9BVQ7 753 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 DGCR6LQ9BY27 220 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 TWSG1Q9GZX9 223 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 PAK1IP1Q9NWT1 392 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SCN3BQ9NY72 215 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 POFUT2Q9Y2G5 429 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SNRNP200O75643 2136 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 FANCMQ8IYD8 2048 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SCN3AQ9NY46 2000 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 FAM20BO75063 409 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SEMA7AO75326 666 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 HTR1AP08908 422 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 NME1P15531 152 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 PORP16435 677 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 NT5EP21589 574 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 CSNK1EP49674 416 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 HMGA2P52926 109 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 STARD6P59095 220 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 RACK1P63244 317 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 CHRNEQ04844 493 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 MAD2L1BPQ15013 274 aaPredicted RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 CEBPEQ15744 281 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 TRMT12Q53H54 448 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SLC16A11Q8NCK7 471 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 TMEM52Q8NDY8 209 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 OR9A4Q8NGU2 314 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 BBS10Q8TAM1 723 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 FAM174AQ8TBP5 190 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 APOBEC4Q8WW27 367 aaKnown RBP8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 ISOC1Q96CN7 298 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 SLC35A4Q96G79 324 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 GABARAPL3Q9BY60 117 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 ACTRT3Q9BYD9 372 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 ERVK-18Q9QC07 812 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 WNT16Q9UBV4 365 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 POMT2Q9UKY4 750 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 PCDHGA6Q9Y5G7 932 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 HSPE1-MOB4S4R3N1 261 aa8.94□□□□□ -0.98
COL6A4P1-201ENST00000446690 A0A0G2JPF8 293 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 A0A1W2PR77 199 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 HNRNPCL2B2RXH8 293 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 HNRNPCL3B7ZW38 293 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 PCDHGA12O60330 932 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 OR10H3O60404 316 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 MAN1A2O60476 641 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 RDH16O75452 317 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 H1F0P07305 194 aaKnown RBP8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 DCNP07585 359 aaKnown RBP8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 HNRNPCL4P0DMR1 293 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 CPMP14384 443 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 RELAQ04206 551 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 ZNF311Q5JNZ3 666 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 DCST1Q5T197 706 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 TMEM236Q5W0B7 351 aa8.93□□□□□ -0.98
COL6A4P1-201ENST00000446690 XAF1Q6GPH4 301 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms