RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-210	ENST00000442216	LBP	P18428	481 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PRPS1L1	P21108	318 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	GPX3	P22352	226 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	HPCAL1	P37235	193 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PSPH	P78330	225 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MRPS35	P82673	323 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	LTB4R	Q15722	352 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PRR30	Q53SZ7	412 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	OGFOD2	Q6N063	350 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	LYPD8	Q6UX82	237 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	IL20RB	Q6UXL0	311 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	RTL4	Q6ZR62	310 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	OR9A2	Q8NGT5	310 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZFP28	Q8NHY6	868 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PIWIL2	Q8TC59	973 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	LRRC8C	Q8TDW0	803 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	GRHL3	Q8TE85	626 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	GFM2	Q969S9	779 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SPACA9	Q96E40	222 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	C7orf26	Q96N11	449 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	AMDHD1	Q96NU7	426 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	GAL3ST4	Q96RP7	486 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PRPF18	Q99633	342 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	C1orf50	Q9BV19	199 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	TRIM4	Q9C037	500 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	GLIPR2	Q9H4G4	154 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	INTS9	Q9NV88	658 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZNF446	Q9NWS9	450 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SH3BP4	Q9P0V3	963 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	BCAP29	Q9UHQ4	241 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	NTNG1	Q9Y2I2	539 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	NUP214	P35658	2090 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZGRF1	Q86YA3	2104 aa		13.9	□□□□□ -0.18
CSNK1E-210	ENST00000442216	AKAP10	O43572	662 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ZNF354A	O60765	605 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	COQ9	O75208	318 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	OR6B1	O95007	311 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	LRAT	O95237	230 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	FBXO45	P0C2W1	286 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	PPIC	P45877	212 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	TMED10	P49755	219 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	EMD	P50402	254 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ST13	P50502	369 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	CLDN8	P56748	225 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	NRG3	P56975	720 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	PTGR1	Q14914	329 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	EXOSC7	Q15024	291 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	MLC1	Q15049	377 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	MAPKAPK3	Q16644	382 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ZNF791	Q3KP31	576 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ZNF385B	Q569K4	471 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	FHL5	Q5TD97	284 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	GALNTL5	Q7Z4T8	443 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	WDR75	Q8IWA0	830 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	RIMKLA	Q8IXN7	391 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	POGLUT1	Q8NBL1	392 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	PSD4	Q8NDX1	1056 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	OR52R1	Q8NGF1	315 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	CLHC1	Q8NHS4	586 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	DYDC1	Q8WWB3	177 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	HSPBAP1	Q96EW2	488 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	PPP1R36	Q96LQ0	422 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	TAAR6	Q96RI8	345 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	KLHL1	Q9NR64	748 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ATAD3A	Q9NVI7	634 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	TAS2R9	Q9NYW1	312 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	MAP10	Q9P2G4	905 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	VPS4A	Q9UN37	437 aa		13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ESPL1	Q14674	2120 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	NIN	Q8N4C6	2090 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	SDHD	O14521	159 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ACOX3	O15254	700 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ATP8B1	O43520	1251 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	WISP1	O95388	367 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	G6PD	P11413	515 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	NAGA	P17050	411 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	DRD5	P21918	477 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	NR0B1	P51843	470 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	DUSP8	Q13202	625 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	IGFBP7	Q16270	282 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	NTRK2	Q16620	822 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	CAMKMT	Q7Z624	323 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	OR2L13	Q8N349	312 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	OR7G2	Q8NG99	324 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	NR4A3	Q92570	626 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	KAT2A	Q92830	837 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	COQ8B	Q96D53	544 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	ELP4	Q96EB1	424 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	LCOR	Q96JN0	433 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	MAEL	Q96JY0	434 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	SLX1A	Q9BQ83	275 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	HES7	Q9BYE0	225 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	SH2D2A	Q9NP31	389 aa		13.88	□□□□□ -0.19
CSNK1E-210	ENST00000442216	OLAH	Q9NV23	265 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms