RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TRMT12Q53H54 448 aaKnown RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PRR30Q53SZ7 412 aaPredicted RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 OGFOD2Q6N063 350 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 FAM180AQ6UWF9 173 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 RTL4Q6ZR62 310 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 LARP4Q71RC2 724 aaKnown RBP eCLIP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ATCAYQ86WG3 371 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF227Q86WZ6 799 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 WDR75Q8IWA0 830 aaKnown RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 BCORP1Q8N888 145 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 GOLM1Q8NBJ4 401 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 FAM98AQ8NCA5 519 aaKnown RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 OR52R1Q8NGF1 315 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 DNAJB8Q8NHS0 232 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ZFP28Q8NHY6 868 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ADIPOR1Q96A54 375 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ZBED6CLQ96FA7 236 aaPredicted RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PPP1R36Q96LQ0 422 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 C7orf26Q96N11 449 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 AMDHD1Q96NU7 426 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 PRPF18Q99633 342 aaKnown RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 GLIPR2Q9H4G4 154 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 TIMMDC1Q9NPL8 285 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ACSS1Q9NUB1 689 aaPredicted RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ATAD3AQ9NVI7 634 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 SH3BP4Q9P0V3 963 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ERVK-11Q9UQG0 969 aa10.93□□□□□ -0.66
HSPG2-206ENST00000439717 KLF13Q9Y2Y9 288 aaPredicted RBP10.93□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF462Q96JM2 2506 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 CAPN14A8MX76 684 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 SDHDO14521 159 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 ACOX3O15254 700 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 COQ9O75208 318 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 CRYABP02511 175 aaKnown RBP10.92□□□□□ -0.66
HSPG2-206ENST00000439717 FBXO45P0C2W1 286 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 KITP10721 976 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 G6PDP11413 515 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 GPX3P22352 226 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 PTGER1P34995 402 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 EMDP50402 254 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 NR0B1P51843 470 aaKnown RBP10.92□□□□□ -0.66
HSPG2-206ENST00000439717 NRG3P56975 720 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 PSPHP78330 225 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 DUSP8Q13202 625 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 EXOSC7Q15024 291 aaKnown RBP10.92□□□□□ -0.66
HSPG2-206ENST00000439717 MLC1Q15049 377 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 MAPKAPK3Q16644 382 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF791Q3KP31 576 aaPredicted RBP10.92□□□□□ -0.66
HSPG2-206ENST00000439717 FHL5Q5TD97 284 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 ANKRD26P1Q6NSI1 321 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 IL20RBQ6UXL0 311 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 SPATA19Q7Z5L4 167 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 GALNT11Q8NCW6 608 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 OR7G2Q8NG99 324 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 GRHL3Q8TE85 626 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 FAR1Q8WVX9 515 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 CKAP2Q8WWK9 683 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 KAT2AQ92830 837 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 SPACA9Q96E40 222 aaPredicted RBP10.92□□□□□ -0.66
HSPG2-206ENST00000439717 HSPBAP1Q96EW2 488 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 MAGEB18Q96M61 343 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 HES7Q9BYE0 225 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 TRIM4Q9C037 500 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 KLHL1Q9NR64 748 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 ASF1BQ9NVP2 202 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 TAS2R9Q9NYW1 312 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 MAP10Q9P2G4 905 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
HSPG2-206ENST00000439717 NTNG1Q9Y2I2 539 aa10.92□□□□□ -0.66
HSPG2-206ENST00000439717 ASPDHA6ND91 283 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 KLRC4-KLRK1H3BQV0 150 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF354AO60765 605 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-206ENST00000439717 TGDSO95455 350 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 NAGAP17050 411 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 DRD5P21918 477 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 PPICP45877 212 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 TMED10P49755 219 aaKnown RBP10.91□□□□□ -0.66
HSPG2-206ENST00000439717 MANFP55145 182 aaKnown RBP10.91□□□□□ -0.66
HSPG2-206ENST00000439717 IGFBP7Q16270 282 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF385BQ569K4 471 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 HSP90B2PQ58FF3 399 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 CPTPQ5TA50 214 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 ZNF324BQ6AW86 544 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-206ENST00000439717 TMEM107Q6UX40 140 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 LYPD8Q6UX82 237 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 RGS9BPQ6ZS82 235 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 MDGA2Q7Z553 956 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 CAMKMTQ7Z624 323 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 RIMKLAQ8IXN7 391 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 OR2L13Q8N349 312 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 ARFGAP2Q8N6H7 521 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 POGLUT1Q8NBL1 392 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 PSD4Q8NDX1 1056 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 SIMC1Q8NDZ2 872 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 ACTRT2Q8TDY3 377 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 CIDECQ96AQ7 238 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-206ENST00000439717 COQ8BQ96D53 544 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 ELP4Q96EB1 424 aa10.91□□□□□ -0.66
HSPG2-206ENST00000439717 LCORQ96JN0 433 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms