RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 DNAJC15Q9Y5T4 150 aa22.14■■□□□ 1.13
CPNE1-217ENST00000439669 ICE1Q9Y2F5 2266 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 DIDO1Q9BTC0 2240 aaKnown RBP22.13■■□□□ 1.13
CPNE1-217ENST00000439669 CBX7O95931 251 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 PRPH2P23942 346 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 TMED10P49755 219 aaKnown RBP22.13■■□□□ 1.13
CPNE1-217ENST00000439669 DUSP8Q13202 625 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 TRMT12Q53H54 448 aaKnown RBP22.13■■□□□ 1.13
CPNE1-217ENST00000439669 ZNF628Q5EBL2 1059 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 FAM71E1Q6IPT2 247 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 HOMEZQ8IX15 550 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 PRR22Q8IZ63 422 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 FAM9CQ8IZT9 166 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 CLYBLQ8N0X4 340 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 SIMC1Q8NDZ2 872 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 OR52N2Q8NGI0 321 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 OR2T11Q8NH01 316 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 ZNF675Q8TD23 568 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 TWIST2Q8WVJ9 160 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 METTL2AQ96IZ6 378 aaKnown RBP22.13■■□□□ 1.13
CPNE1-217ENST00000439669 DEFB127Q9H1M4 99 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 TUBB1Q9H4B7 451 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 IL1RL2Q9HB29 575 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 SH2D2AQ9NP31 389 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 TUBA8Q9NY65 449 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-217ENST00000439669 ZNF835Q9Y2P0 537 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 NPFFR2Q9Y5X5 522 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 CROCCQ5TZA2 2017 aa22.13■■□□□ 1.13
CPNE1-217ENST00000439669 PDE9AO76083 593 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 LRATO95237 230 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 SERPINB5P36952 375 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 ETV4P43268 484 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 RPL38P63173 70 aaKnown RBP22.12■■□□□ 1.13
CPNE1-217ENST00000439669 KCNJ2P63252 427 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 RPS6KA2Q15349 733 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 NTRK2Q16620 822 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 RGS9BPQ6ZS82 235 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 RNF165Q6ZSG1 346 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 IKBIPQ70UQ0 350 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 CROCCP2Q86T23 111 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 EXOC3L1Q86VI1 746 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 NUDCD3Q8IVD9 361 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 FBXW8Q8N3Y1 598 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 C17orf47Q8NEP4 570 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 KAT2AQ92830 837 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 PKNOX2Q96KN3 472 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 NXF5Q9H1B4 397 aaKnown RBP22.12■■□□□ 1.13
CPNE1-217ENST00000439669 CNIH4Q9P003 139 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 PRODH2Q9UF12 536 aa22.12■■□□□ 1.13
CPNE1-217ENST00000439669 WBP11Q9Y2W2 641 aaKnown RBP22.12■■□□□ 1.13
CPNE1-217ENST00000439669 CHCHD2Q9Y6H1 151 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-217ENST00000439669 SPTBN1Q01082 2364 aaKnown RBP22.12■■□□□ 1.13
CPNE1-217ENST00000439669 SPTAN1Q13813 2472 aaKnown RBP22.12■■□□□ 1.13
CPNE1-217ENST00000439669 EML6Q6ZMW3 1958 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 A0A1B0GTH9 108 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 NPIPB8E9PQR5 432 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 TP53I11O14683 189 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 FGF4P08620 206 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 MYZAPP0CAP1 466 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 MPIP34949 423 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 SOX18P35713 384 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 SERPINB4P48594 390 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 FBXW4P57775 412 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 KIAA0040Q15053 153 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 Q6ZPB1 254 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-217ENST00000439669 Q6ZSR9 355 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 DIO2Q92813 273 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 ANKRA2Q9H9E1 313 aa22.11■■□□□ 1.13
CPNE1-217ENST00000439669 SSU72Q9NP77 194 aaKnown RBP22.11■■□□□ 1.13
CPNE1-217ENST00000439669 BOKQ9UMX3 212 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-217ENST00000439669 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.11■■□□□ 1.13
CPNE1-217ENST00000439669 USP9YO00507 2555 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 WDR91A4D1P6 747 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 PRRG2O14669 202 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 PIP5K1BO14986 540 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 ERLIN1O75477 346 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 BCAS2O75934 225 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 GLSO94925 669 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 ESRRAP11474 423 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 ABCD3P28288 659 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 NTSP30990 170 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 PTGS2P35354 604 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 NCBP2P52298 156 aaKnown RBP eCLIP22.1■■□□□ 1.139e-8■□□□□ 9.8
CPNE1-217ENST00000439669 FOXO1Q12778 655 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 CEBPEQ15744 281 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 GALNTL6Q49A17 601 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 MAMDC2Q7Z304 686 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 FGD2Q7Z6J4 655 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 CHERPQ8IWX8 916 aaKnown RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 FAM109AQ8N4B1 249 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 TMEM251Q8N6I4 163 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.1■■□□□ 1.138e-8■■■■■ 32.7
CPNE1-217ENST00000439669 CCDC120Q96HB5 630 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 LCORQ96JN0 433 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 JSRP1Q96MG2 331 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 CCT7Q99832 543 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 CNOT11Q9UKZ1 510 aaKnown RBP22.1■■□□□ 1.13
CPNE1-217ENST00000439669 COL12A1Q99715 3063 aa22.1■■□□□ 1.13
CPNE1-217ENST00000439669 MYO7BQ6PIF6 2116 aa22.09■■□□□ 1.13
CPNE1-217ENST00000439669 LSM1O15116 133 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms