RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PLA2G2FQ9BZM2 168 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 IL1RAPQ9NPH3 570 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 TAAR2Q9P1P5 351 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 COMMD3Q9UBI1 195 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF225Q9UK10 706 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 MKLN1Q9UL63 735 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 IGLV3-16A0A075B6K0 115 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 NUDT7P0C024 238 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 TCF3P15923 654 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 S100A1P23297 94 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 EXOC3L2Q2M3D2 409 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 PHF19Q5T6S3 580 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 IGFN1Q86VF2 1251 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 IL17RCQ8NAC3 791 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 RNF31Q96EP0 1072 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 PITHD1Q9GZP4 211 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 TIGARQ9NQ88 270 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 COQ3Q9NZJ6 369 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 SSR3Q9UNL2 185 aa10.96□□□□□ -0.65
TRAPPC9-202ENST00000438773 FCER2P06734 321 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 CD38P28907 300 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 GABRA3P34903 492 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 AKR1D1P51857 326 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 NCS1P62166 190 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 DEFB133Q30KQ1 61 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 C6orf141Q5SZD1 244 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 SFTPA1Q8IWL2 248 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 ZNF248Q8NDW4 579 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 ADAMTS16Q8TE57 1224 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 OR51V1Q9H2C8 321 aa10.96□□□□□ -0.66
TRAPPC9-202ENST00000438773 NCOR1O75376 2440 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 TLR4O00206 839 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 CASKO14936 926 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 IDUAP35475 653 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 RPP38P78345 283 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 LGALS3BPQ08380 585 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 CAMK1Q14012 370 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 AGBL4Q5VU57 503 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SHQ1Q6PI26 577 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 OR8H1Q8NGG4 311 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 MRGPRX1Q96LB2 322 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 MAPKAP1Q9BPZ7 522 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SP140LQ9H930 580 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 FAM118AQ9NWS6 357 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ABCD2Q9UBJ2 740 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SIT1Q9Y3P8 196 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 RIIAD1A6NNX1 92 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 GAPDHSO14556 408 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 CPNE3O75131 537 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 OR2B3O76000 313 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 INMTO95050 263 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 CH25HO95992 272 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 HPRP00739 348 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 TFPIP10646 304 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 NDUFV2P19404 249 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 PSMA1P25786 263 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 OPRL1P41146 370 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SELENOWP63302 87 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 RPS26P11Q5JNZ5 115 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 KIAA0895LQ68EN5 471 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 DENND6BQ8NEG7 585 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 OR2L3Q8NG85 312 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 OR13H1Q8NG92 308 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 OR4C6Q8NH72 309 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 GAL3ST3Q96A11 431 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 PEX11GQ96HA9 241 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 CCDC115Q96NT0 180 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 DOK1Q99704 481 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 IFT27Q9BW83 186 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ZNF236Q9UL36 1845 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 MITFO75030 526 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 HMGN2P05204 90 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 IGFALSP35858 605 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 MC3RP41968 323 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SPCS2Q15005 226 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 MOGQ16653 247 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ADNP2Q6IQ32 1131 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ZNF544Q6NX49 715 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 CHMP1BQ7LBR1 199 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SPRED1Q7Z699 444 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 OR5D16Q8NGK9 328 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ZNF420Q8TAQ5 688 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SUN3Q8TAQ9 357 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 IPCEF1Q8WWN9 437 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 RFKQ969G6 155 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 TRNT1Q96Q11 434 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 C1QTNF2Q9BXJ5 285 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ACTL8Q9H568 366 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ERVK-18Q9QC07 812 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 NFKBIL1Q9UBC1 381 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 SERGEFQ9UGK8 458 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 MYLKQ15746 1914 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 IQCMA0A1B0GVH7 501 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 ASPDHA6ND91 283 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 RHCEP18577 417 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 GSTM3P21266 225 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 GSTM2P28161 218 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 PCGF2P35227 344 aa10.95□□□□□ -0.66
TRAPPC9-202ENST00000438773 NR4A2P43354 598 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms