RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PEX11GQ96HA9 241 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ERCC6L2Q5T890 1561 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 IGLON5A6NGN9 336 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF891A8MT65 544 aaPredicted RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 PRAMEF26H0Y7S4 382 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 XPNPEP2O43895 674 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 EPOP01588 193 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 GBAP04062 536 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CREB1P16220 341 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 CRABP1P29762 137 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 EMP2P54851 167 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 KLF1Q13351 362 aaPredicted RBP10.7□□□□□ -0.7
SCN4A-201ENST00000435607 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 PXYLP1Q8TE99 480 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 ARNT2Q9HBZ2 717 aa10.7□□□□□ -0.7
SCN4A-201ENST00000435607 TPPPO94811 219 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 SERPINE2P07093 398 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 MRPL3P09001 348 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 CD48P09326 243 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 EMX2Q04743 252 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 UGT3A2Q3SY77 523 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 SLX4IPQ5VYV7 408 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 OR51G2Q8NGK0 314 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ALG3Q92685 438 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 HSH2DQ96JZ2 352 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 CDC6Q99741 560 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF160Q9HCG1 818 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 MAB21L2Q9Y586 359 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 PDE4DIPQ5VU43 2346 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 MEGF11A6BM72 1044 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 F5H0A9 414 aaPredicted RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 HTR3AP46098 478 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ARHGAP19Q14CB8 494 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 CNN3Q15417 329 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 EXOSC6Q5RKV6 272 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 KIAA1614Q5VZ46 1190 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 LARP4Q71RC2 724 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 HAVCR2Q8TDQ0 301 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 BRI3BPQ8WY22 251 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF689Q96CS4 500 aaPredicted RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 OR14A2Q96R54 314 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 NTPCRQ9BSD7 190 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 SLC39A1Q9NY26 324 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 DNAJC27Q9NZQ0 273 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 H7C2Y5 167 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 TOR1AO14656 332 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 KLRC4O43908 158 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 FMO6PO60774 539 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 NPRL3Q12980 569 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 C6orf183Q5T699 404 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 PHTF2Q8N3S3 785 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 HERC2P3Q9BVR0 1158 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 NLE1Q9NVX2 485 aaPredicted RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 OXSMQ9NWU1 459 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 TAS2R20P59543 309 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 GPX6P59796 221 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ACTBP60709 375 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ACTG1P63261 375 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 HTD2P86397 168 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 NKPD1Q17RQ9 610 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 DCAF12Q5T6F0 453 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 FBXW5Q969U6 566 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 SLC30A2Q9BRI3 323 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 SLC17A9Q9BYT1 436 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 TAS2R3Q9NYW6 316 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 CNOT11Q9UKZ1 510 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 SOX14O95416 240 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 LCKP06239 509 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 KCNE1P15382 129 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 HNRNPH3P31942 346 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ALDH3B2P48448 385 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF280AP59817 542 aaPredicted RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 MEF2AQ02078 507 aaPredicted RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 CRYZQ08257 329 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 CARM1Q86X55 608 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 PRR18Q8N4B5 295 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 OR52P1PQ8NH57 321 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 PTERQ96BW5 349 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 PFDN5Q99471 154 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 DPH7Q9BTV6 452 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 A0A0U1RQJ8 604 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 NARSO43776 548 aaKnown RBP10.69□□□□□ -0.7
SCN4A-201ENST00000435607 PRAMEF11O60813 436 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 GDF1P27539 372 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 ARHGAP1Q07960 439 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 RNF175Q8N4F7 328 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 FER1L6-AS2Q96M78 137 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 TEPSINQ96N21 525 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 POPDC3Q9HBV1 291 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 AMBNQ9NP70 447 aa10.69□□□□□ -0.7
SCN4A-201ENST00000435607 J3KR12 359 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 SYT7O43581 403 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 HTR3BO95264 441 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 CRYZL1O95825 349 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 FCER2P06734 321 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 FUT4P22083 530 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 KIR2DL3P43628 341 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 RABGGTBP53611 331 aa10.68□□□□□ -0.7
SCN4A-201ENST00000435607 GRAMD2AQ8IUY3 354 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms