RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 SLC26A5P58743 744 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 SLC16A9Q7RTY1 509 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 WDR77Q9BQA1 342 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 MAGIXQ9H6Y5 334 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 ATE1O95260 518 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 SOX3P41225 446 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 NR0B1P51843 470 aaKnown RBP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 LUMP51884 338 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF33AQ06730 810 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 RIPPLY1Q0D2K3 151 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 TRAM1Q15629 374 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 NNATQ16517 81 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PM20D2Q8IYS1 436 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 FAM86B1Q8N7N1 296 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 OR9Q2Q8NGE9 314 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 OR5P2Q8WZ92 322 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 RANBP9Q96S59 729 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PRDM9Q9NQV7 894 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 DHDHQ9UQ10 334 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 G3V2L1 256 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 UBFD1O14562 309 aaKnown RBP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 GRID2O43424 1007 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PRSS56P0CW18 603 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 CD9P21926 228 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PAGE3Q5JUK9 113 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 HES5Q5TA89 166 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 C22orf39Q6P5X5 142 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 SCGB1C1Q8TD33 95 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 NR4A3Q92570 626 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 HHIPL1Q96JK4 782 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 ZDHHC4Q9NPG8 344 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 ENPP5Q9UJA9 477 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 SOBPA7XYQ1 873 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PRKYO43930 277 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 AQP2P41181 271 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 ACBD7Q8N6N7 88 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PAPD5Q8NDF8 572 aaKnown RBP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 OR8K5Q8NH50 307 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPRU-204ENST00000428026 SNAPC3Q92966 411 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 HSPE1-MOB4S4R3N1 261 aa13.82□□□□□ -0.2
PTPRU-204ENST00000428026 CDC123O75794 336 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 TMEM115Q12893 351 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 GNMTQ14749 295 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 AAK1Q2M2I8 961 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 LIPJQ5W064 366 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 METTL27Q8N6F8 245 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF283Q8N7M2 679 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 IMP4Q96G21 291 aaKnown RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 IGKV6-21A0A0C4DH24 114 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 ANHXE9PGG2 379 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 S100PP25815 95 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 MTNR1AP48039 350 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 LRIT3Q3SXY7 679 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 CNIH2Q6PI25 160 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 GTPBP8Q8N3Z3 284 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 DTWD1Q8N5C7 304 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 DEFB119Q8N690 84 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF709Q8N972 641 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 SNIP1Q8TAD8 396 aaKnown RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 FKBP10Q96AY3 582 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 FAM46AQ96IP4 442 aaKnown RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 TEX10Q9NXF1 929 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 INTS6Q9UL03 887 aaKnown RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 MAGED1Q9Y5V3 778 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 ITGB4P16144 1822 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 SLX4Q8IY92 1834 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 TSPAN6O43657 245 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 GNSP15586 552 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 RAB3BP20337 219 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 GABRA3P34903 492 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 POU6F2P78424 691 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 GRIN2CQ14957 1233 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 ITPRIPL2Q3MIP1 535 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 TMEM107Q6UX40 140 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 GPAT4Q86UL3 456 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 DCUN1D3Q8IWE4 304 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 SLC30A3Q99726 388 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 SYNPO2LQ9H987 977 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 ATXN7L1Q9ULK2 861 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 RTCAO00442 366 aaKnown RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 HNF1BP35680 557 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 DEFB103AP81534 67 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 OC90Q02509 493 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 PLBD1Q6P4A8 553 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 LRFN4Q6PJG9 635 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 C6orf120Q7Z4R8 191 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 NUP43Q8NFH3 380 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 TRMT10AQ8TBZ6 339 aaKnown RBP13.81□□□□□ -0.2
PTPRU-204ENST00000428026 INPP5KQ9BT40 448 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 SFXN1Q9H9B4 322 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 FZD3Q9NPG1 666 aa13.81□□□□□ -0.2
PTPRU-204ENST00000428026 LOC105369274A0A096LPK9 316 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 A0A0G2JMP0 313 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 KCNJ13O60928 360 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 TFP02787 698 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 HOXB2P14652 356 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF30P17039 623 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 CD34P28906 385 aa13.8□□□□□ -0.2
PTPRU-204ENST00000428026 STEAP4Q687X5 459 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms