RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 C6orf52Q5T4I8 152 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 TMEM81Q6P7N7 255 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 GPR180Q86V85 440 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 NKAPQ8N5F7 415 aaKnown RBP12.82□□□□□ -0.36
HDAC6-206ENST00000426196 SNX31Q8N9S9 440 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 RNF214Q8ND24 703 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 GTPBP3Q969Y2 492 aaKnown RBP12.82□□□□□ -0.36
HDAC6-206ENST00000426196 REPS1Q96D71 796 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 SFXN2Q96NB2 322 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 BEX2Q9BXY8 128 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 CNOT10Q9H9A5 744 aaKnown RBP12.82□□□□□ -0.36
HDAC6-206ENST00000426196 DNAJC11Q9NVH1 559 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 KLRF1Q9NZS2 232 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 FRG2CA6NGY1 282 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 NCF1BA6NI72 391 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 NCF1CA8MVU1 366 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 EMC8O43402 210 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 KLF4O43474 513 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 ABCB7O75027 752 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 ICOSLGO75144 302 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 SH3BGRLO75368 114 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 GPR75O95800 540 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 TTC4O95801 387 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 PLAUP00749 431 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 KRT14P02533 472 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 ABCB1P08183 1280 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 CD8BP10966 210 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 NCF1P14598 390 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 ZNF708P17019 499 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 ACVR1BP36896 505 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 GMPRP36959 345 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 KIR2DL2P43627 348 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 CLDN18P56856 261 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 RUNX1T1Q06455 604 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 SNTA1Q13424 505 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 C18orf63Q68DL7 685 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 C22orf34Q6ZV56 151 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 TCAIMQ8N3R3 496 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 RNF10Q8N5U6 811 aaKnown RBP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 C17orf47Q8NEP4 570 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 AKAP1Q92667 903 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 WDR34Q96EX3 536 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 PLPPR2Q96GM1 343 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 CENPKQ9BS16 269 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 SLCO5A1Q9H2Y9 848 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 GALNT9Q9HCQ5 603 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 PPANQ9NQ55 473 aaKnown RBP12.81□□□□□ -0.36
HDAC6-206ENST00000426196 SLC17A6Q9P2U8 582 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 CTNNAL1Q9UBT7 734 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 LPAR3Q9UBY5 353 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 CADP27708 2225 aa12.81□□□□□ -0.36
HDAC6-206ENST00000426196 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 C2orf72A6NCS6 295 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 SAP18O00422 153 aaKnown RBP12.8□□□□□ -0.36
HDAC6-206ENST00000426196 PRAMEF4O60810 478 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 PRKRAO75569 313 aaKnown RBP12.8□□□□□ -0.36
HDAC6-206ENST00000426196 PPM1BO75688 479 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 TGFB1P01137 390 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 THBDP07204 575 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 CD22P20273 847 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 SRD5A2P31213 254 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 RAP1GDS1P52306 607 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 TSNQ15631 228 aaKnown RBP12.8□□□□□ -0.36
HDAC6-206ENST00000426196 PDK4Q16654 411 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 SPANXN3Q5MJ09 141 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 C6orf163Q5TEZ5 329 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 PRAMEF9Q5VWM5 478 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 OR4C11Q6IEV9 310 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 ZNF473Q8WTR7 871 aaKnown RBP12.8□□□□□ -0.36
HDAC6-206ENST00000426196 UBE2E3Q969T4 207 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 ADIPOR1Q96A54 375 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 CMTM7Q96FZ5 175 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 TMEM204Q9BSN7 226 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 SORBS1Q9BX66 1292 aaKnown RBP12.8□□□□□ -0.36
HDAC6-206ENST00000426196 CXorf21Q9HAI6 301 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 HEY2Q9UBP5 337 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 PROCRQ9UNN8 238 aa12.8□□□□□ -0.36
HDAC6-206ENST00000426196 MALRD1Q5VYJ5 2156 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 PRAMEF25A6NGN4 478 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 OVOL3O00110 214 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 ADAM11O75078 769 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 CGAP01215 116 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 SLC35E2BP0CK96 405 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 SLC35E2P0CK97 266 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 NR2F6P10588 404 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 PCNAP12004 261 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 NAGAP17050 411 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 THBS2P35442 1172 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 HNRNPH2P55795 449 aaKnown RBP12.79□□□□□ -0.36
HDAC6-206ENST00000426196 IRF8Q02556 426 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 BCL2A1Q16548 175 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 EXOC3L2Q2M3D2 409 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 KHDRBS2Q5VWX1 349 aaKnown RBP12.79□□□□□ -0.36
HDAC6-206ENST00000426196 NUP54Q7Z3B4 507 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 WDSUB1Q8N9V3 476 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 ZNF610Q8N9Z0 462 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 RGMAQ96B86 450 aa12.79□□□□□ -0.36
HDAC6-206ENST00000426196 CERS2Q96G23 380 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms