RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SOX30O94993 753 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PCNAP12004 261 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 UGT2B10P36537 528 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PTGDSP41222 190 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 FNTAP49354 379 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 HMBOX1Q6NT76 420 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PODNL1Q6PEZ8 512 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 ZNF474Q6S9Z5 364 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PLEKHM3Q6ZWE6 761 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 NUP54Q7Z3B4 507 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 MEIOBQ8N635 442 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 HGDQ93099 445 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 CFAP36Q96G28 342 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 MED18Q9BUE0 208 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 ZNF717Q9BY31 904 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 CD244Q9BZW8 370 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 OR10A5Q9H207 317 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 DLGAP4Q9Y2H0 992 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 TEX264Q9Y6I9 313 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 LRRC14BA6NHZ5 514 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PLOD2O00469 737 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 CCNT2O60583 730 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PPM1BO75688 479 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 TGM6O95932 706 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 STARP49675 285 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 LHX2P50458 406 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 RPS13P62277 151 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 MGAT5Q09328 741 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 HP1BP3Q5SSJ5 553 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 LRRC70Q7Z2Q7 622 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PRR22Q8IZ63 422 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 SPATA6LQ8N4H0 392 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 WDSUB1Q8N9V3 476 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 OR14L1PQ8NHC6 308 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 PBKQ96KB5 322 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 NAP1L3Q99457 506 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 METTL7AQ9H8H3 244 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 ACTR8Q9H981 624 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 LYARQ9NX58 379 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 MOCS1Q9NZB8 636 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 RNF112Q9ULX5 631 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 CHMP2BQ9UQN3 213 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 TSC22D4Q9Y3Q8 395 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 WIF1Q9Y5W5 379 aa15.17■□□□□ 0.02
CHCHD3-202ENST00000423635 HEATR5AQ86XA9 2040 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 A0A0A6YYD5 115 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 GLOD5A6NK44 160 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 IFNA2P01563 188 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 CT62P0C5K7 136 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 CD1DP15813 335 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 ZNF708P17019 499 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 KRT15P19012 456 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 PIK3CBP42338 1070 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 RAP1GDS1P52306 607 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 CLDN18P56856 261 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 ILF2Q12905 390 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 TNK1Q13470 666 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 PPP1R7Q15435 360 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 OR4D1Q15615 310 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 OR2A2Q6IF42 318 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 AAGABQ6PD74 315 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 GRAMD2AQ8IUY3 354 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 GALNT12Q8IXK2 581 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 PDIK1LQ8N165 341 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 RNF175Q8N4F7 328 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 OR7G1Q8NGA0 311 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 HUS1BQ8NHY5 278 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 TMEM158Q8WZ71 300 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 FAM111AQ96PZ2 611 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 NODALQ96S42 347 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 CENPKQ9BS16 269 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 OSBPL11Q9BXB4 747 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 RHOJQ9H4E5 214 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 DDX31Q9H8H2 851 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 PRM3Q9NNZ6 103 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 SERHLQ9NQF3 203 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 CD274Q9NZQ7 290 aa15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 MRPS18CQ9Y3D5 142 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-202ENST00000423635 EXPH5Q8NEV8 1989 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 USF3Q68DE3 2245 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 A0A1W2PS29 197 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 C2orf72A6NCS6 295 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 C16orf97H3BN30 126 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 TMPRSS11DO60235 418 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 SMNDC1O75940 238 aaKnown RBP eCLIP15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 C8BP07358 591 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 FAM58BPP0C7Q3 252 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 CCDC166P0CW27 439 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 NR2F6P10588 404 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 POU2F1P14859 743 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 S1PR1P21453 382 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 GPX3P22352 226 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 IVDP26440 423 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 CDC25BP30305 580 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 CCKARP32238 428 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 BSGP35613 385 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 GMPRP36959 345 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 ATP6V0D1P61421 351 aa15.15■□□□□ 0.02
CHCHD3-202ENST00000423635 POU4F1Q01851 419 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms