RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 WDSUB1Q8N9V3 476 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 BBOF1Q8ND07 529 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 FNDC9Q8TBE3 224 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 PIWIL2Q8TC59 973 aaKnown RBP8.04□□□□□ -1.12
TRIM39-206ENST00000420746 CD200R1Q8TD46 325 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 KRT35Q92764 455 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 S100PBPQ96BU1 408 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 GMPPAQ96IJ6 420 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-206ENST00000420746 RADILQ96JH8 1075 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 HIST1H2AHQ96KK5 128 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 NDNQ99608 321 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 HIST1H2AJQ99878 128 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 FAM118BQ9BPY3 351 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 H2AFJQ9BTM1 129 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 OSBPL8Q9BZF1 889 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 ROGDIQ9GZN7 287 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 REXO4Q9GZR2 422 aaKnown RBP8.04□□□□□ -1.12
TRIM39-206ENST00000420746 COPS7BQ9H9Q2 264 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-206ENST00000420746 MYOZ1Q9NP98 299 aaPredicted RBP8.04□□□□□ -1.12
TRIM39-206ENST00000420746 ANO10Q9NW15 660 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 MED29Q9NX70 200 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 DMGDHQ9UI17 866 aaKnown RBP8.04□□□□□ -1.12
TRIM39-206ENST00000420746 ADAMTS6Q9UKP5 1117 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 CAPN11Q9UMQ6 739 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 PCDHB10Q9UN67 800 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 MAD1L1Q9Y6D9 718 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 COMMD10Q9Y6G5 202 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
TRIM39-206ENST00000420746 SPACA6W5XKT8 324 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 ALPK2Q86TB3 2170 aa8.04□□□□□ -1.12
TRIM39-206ENST00000420746 GOLGA8QA0A0J9YX86 632 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 GOLGA8OA6NCC3 632 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 DPRXA6NFQ7 191 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 GOLGA8NF8WBI6 632 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 GOLGA8RI6L899 631 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 FGF17O60258 216 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 ICOSLGO75144 302 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 SS18L1O75177 396 aaPredicted RBP8.03□□□□□ -1.12
TRIM39-206ENST00000420746 CLEC3AO75596 197 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 TJP3O95049 919 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 VAPBO95292 243 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 CLPSP04118 112 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 BMP4P12644 408 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 GALNSP34059 522 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 FDFT1P37268 417 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 PLA2G16P53816 162 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 HADHBP55084 474 aaKnown RBP8.03□□□□□ -1.12
TRIM39-206ENST00000420746 GDF10P55107 478 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 RPS13P62277 151 aaKnown RBP8.03□□□□□ -1.12
TRIM39-206ENST00000420746 HERVK_113P63132 956 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 ERVK-8P63133 956 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 ID2Q02363 134 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 TGM3Q08188 693 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 PON3Q15166 354 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 TAB1Q15750 504 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 UGT2A3Q6UWM9 527 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 TMEM64Q6YI46 380 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 DGAT2L6Q6ZPD8 337 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 RBM43Q6ZSC3 357 aaKnown RBP8.03□□□□□ -1.12
TRIM39-206ENST00000420746 CENPUQ71F23 418 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 SSX8Q7RTT4 187 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 PLCZ1Q86YW0 608 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 CPNE9Q8IYJ1 553 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 ZNF540Q8NDQ6 660 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 HPS1Q92902 700 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 DHRS9Q9BPW9 319 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 PINK1Q9BXM7 581 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 ERVK-6Q9BXR3 956 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 IL22Q9GZX6 179 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 CCDC68Q9H2F9 335 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 METTL17Q9H7H0 456 aaPredicted RBP8.03□□□□□ -1.12
TRIM39-206ENST00000420746 ERVK-19Q9WJR5 959 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 DYRK1BQ9Y463 629 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 CMYA5Q8N3K9 4069 aa8.03□□□□□ -1.12
TRIM39-206ENST00000420746 LOC390937A0A1W2PQ73 354 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 E7EVH7 732 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 GOLGA8MH3BSY2 632 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 LINC01387J3KSC0 135 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 AP3B1O00203 1094 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 RAMP1O60894 148 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 PPM1BO75688 479 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 ABCB1P08183 1280 aaPredicted RBP8.02□□□□□ -1.13
TRIM39-206ENST00000420746 ALOX15P16050 662 aaPredicted RBP8.02□□□□□ -1.13
TRIM39-206ENST00000420746 KRT15P19012 456 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 ABCD3P28288 659 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 NMBRP28336 390 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 RBMXP38159 391 aaKnown RBP8.02□□□□□ -1.13
TRIM39-206ENST00000420746 DVL1P1P54792 670 aaPredicted RBP8.02□□□□□ -1.13
TRIM39-206ENST00000420746 CLDN15P56746 228 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 C21orf58P58505 322 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 NR1I3Q14994 352 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 CTU2Q2VPK5 515 aaKnown RBP8.02□□□□□ -1.13
TRIM39-206ENST00000420746 HLA-DQA1Q5Y7H0 255 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 TMIGD1Q6UXZ0 262 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 NUP54Q7Z3B4 507 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 TMPRSS11BQ86T26 416 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 TBC1D1Q86TI0 1168 aaPredicted RBP8.02□□□□□ -1.13
TRIM39-206ENST00000420746 FBXL14Q8N1E6 418 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 MUC15Q8N387 334 aa8.02□□□□□ -1.13
TRIM39-206ENST00000420746 METTL25Q8N6Q8 603 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms