RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 MUTYHQ9UIF7 546 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 TESMINQ9Y4I5 508 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 CLCA3PQ9Y6N3 262 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ZFC3H1O60293 1989 aaKnown RBP7.89□□□□□ -1.15
USP54-203ENST00000418501 HTR3EA5X5Y0 456 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 PLOD3O60568 738 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ATP1B1P05026 303 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 LINGO3P0C6S8 592 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ST6GAL1P15907 406 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 EPHA8P29322 1005 aaPredicted RBP7.89□□□□□ -1.15
USP54-203ENST00000418501 MC3RP41968 323 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 TRA2AQ13595 282 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP54-203ENST00000418501 SLC36A3Q495N2 470 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 PMS2CLQ68D20 193 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 GATA6Q92908 595 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ALPK1Q96QP1 1244 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 OR7D2Q96RA2 312 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 IKZF5Q9H5V7 419 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 MKKSQ9NPJ1 570 aaPredicted RBP7.89□□□□□ -1.15
USP54-203ENST00000418501 H2AFY2Q9P0M6 372 aaPredicted RBP7.89□□□□□ -1.15
USP54-203ENST00000418501 LOC100130705A0A1B0GUX0 176 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 SDC3O75056 442 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 EML2O95834 649 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 STATHP02808 62 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 MT-ND1P03886 318 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 SMIM10L1P0DMW3 83 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 DHRS4L2Q6PKH6 230 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ZNF793Q6ZN11 406 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 FAM20CQ8IXL6 584 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ZNF619Q8N2I2 560 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 Q8N9G6 341 aaPredicted RBP7.89□□□□□ -1.15
USP54-203ENST00000418501 SLC38A5Q8WUX1 472 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 RAB8BQ92930 207 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 SMIM10Q96HG1 83 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 LOXL4Q96JB6 756 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 HS6ST2Q96MM7 605 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 CD93Q9NPY3 652 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 PDLIM1O00151 329 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 AHCYL1O43865 530 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 FAM20BO75063 409 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 RDH16O75452 317 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 CPNE6O95741 557 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 CD1EP15812 388 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 KCNJ5P48544 419 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 MVKQ03426 396 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 MICAQ29983 383 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ZIK1Q3SY52 487 aaPredicted RBP7.89□□□□□ -1.15
USP54-203ENST00000418501 C18orf63Q68DL7 685 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 HMBOX1Q6NT76 420 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 TMEM71Q6P5X7 295 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 SLITRK4Q8IW52 837 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 OR52P1PQ8NH57 321 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 TEX47Q8TBZ9 253 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 PATE1Q8WXA2 126 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 TSC22D3Q99576 134 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 ZNF717Q9BY31 904 aaPredicted RBP7.89□□□□□ -1.15
USP54-203ENST00000418501 STRADBQ9C0K7 418 aa7.89□□□□□ -1.15
USP54-203ENST00000418501 A0A1B0GTQ1 180 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 PCDH17O14917 1159 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 CNOT3O75175 753 aaKnown RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 CYC1P08574 325 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 RYKP34925 604 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 RORAP35398 523 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 RPP38P78345 283 aaKnown RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 MFSD12Q6NUT3 480 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 RPL13AP3Q6NVV1 102 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 SLC29A4Q7RTT9 530 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 CMIPQ8IY22 773 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 OR52L1Q8NGH7 329 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 FCGR1BQ92637 280 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 GFM1Q96RP9 751 aaKnown RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 UCK2Q9BZX2 261 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 CCDC90BQ9GZT6 254 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 TOR3AQ9H497 397 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 ZNF304Q9HCX3 659 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 U3KQV3 271 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 ANKRD12Q6UB98 2062 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 C9J4A7 227 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 SGK494L7N484 410 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 KHNYNO15037 678 aaKnown RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 PPM1DO15297 605 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 CTSVO60911 334 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 NME6O75414 186 aaPredicted RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 OPN1SWP03999 348 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 ALPLP05186 524 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 KLK3P07288 261 aaPredicted RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 THBS1P07996 1170 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 TFPTP0C1Z6 253 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 HOXB9P17482 250 aaPredicted RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 GAS6Q14393 721 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 CEBPEQ15744 281 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 TSPYL5Q86VY4 417 aaPredicted RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 ZNF761Q86XN6 746 aaPredicted RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 CHERPQ8IWX8 916 aaKnown RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 ZNF687Q8N1G0 1237 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 OR14A16Q8NHC5 309 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 GNPDA2Q8TDQ7 276 aa7.88□□□□□ -1.15
USP54-203ENST00000418501 MRPL48Q96GC5 212 aaKnown RBP7.88□□□□□ -1.15
USP54-203ENST00000418501 PRRC1Q96M27 445 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms