RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ALKBH4Q9NXW9 302 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 A0A1W2PS29 197 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 LRRC3CA6NJW4 275 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 FAM90A27PA6NNH2 459 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 CDH16O75309 829 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 ATP1B1P05026 303 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 CT62P0C5K7 136 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 NAGAP17050 411 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 S1PR1P21453 382 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 MSX1P28360 303 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 C1orf185Q5T7R7 199 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 PACS2Q86VP3 889 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 CLYBLQ8N0X4 340 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 LIX1Q8N485 282 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 C1orf52Q8N6N3 182 aaKnown RBP23.25■■□□□ 1.31
VEGFA-208ENST00000417285 LRRN4CLQ8ND94 238 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 METTL6Q8TCB7 284 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 SPPL2AQ8TCT8 520 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 MZB1Q8WU39 189 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 L3HYPDHQ96EM0 354 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 ZNF597Q96LX8 424 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 HBEGFQ99075 208 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 ANGPTL4Q9BY76 406 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 TNFRSF10DQ9UBN6 386 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 EML6Q6ZMW3 1958 aa23.25■■□□□ 1.31
VEGFA-208ENST00000417285 ULK1O75385 1050 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 PKNOX1P55347 436 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 FBXW4P57775 412 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 LCP2Q13094 533 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 TCHHL1Q5QJ38 904 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-208ENST00000417285 TMEM64Q6YI46 380 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 DMRTC2Q8IXT2 367 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-208ENST00000417285 VWA5B2Q8N398 1253 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 UBLCP1Q8WVY7 318 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-208ENST00000417285 CCDC126Q96EE4 140 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 PPCSQ9HAB8 311 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 NPDC1Q9NQX5 325 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-208ENST00000417285 SPRR3Q9UBC9 169 aa23.24■■□□□ 1.31
VEGFA-208ENST00000417285 CCDC151A5D8V7 595 aa23.23■■□□□ 1.31
VEGFA-208ENST00000417285 GLRA3O75311 464 aa23.23■■□□□ 1.31
VEGFA-208ENST00000417285 ERAL1O75616 437 aaKnown RBP23.23■■□□□ 1.31
VEGFA-208ENST00000417285 ENO1P06733 434 aaKnown RBP23.23■■□□□ 1.31
VEGFA-208ENST00000417285 KRT15P19012 456 aa23.23■■□□□ 1.31
VEGFA-208ENST00000417285 PRICKLE4Q2TBC4 344 aa23.23■■□□□ 1.31
VEGFA-208ENST00000417285 GBP7Q8N8V2 638 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-208ENST00000417285 ZNF780BQ9Y6R6 833 aa23.23■■□□□ 1.31
VEGFA-208ENST00000417285 PHF3Q92576 2039 aaKnown RBP23.23■■□□□ 1.31
VEGFA-208ENST00000417285 A0A0G2JNJ9 132 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 AHRRA9YTQ3 701 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 ENDOUP21128 410 aaKnown RBP23.22■■□□□ 1.31
VEGFA-208ENST00000417285 GPX3P22352 226 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 GDF1P27539 372 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 FEN1P39748 380 aaKnown RBP23.22■■□□□ 1.31
VEGFA-208ENST00000417285 MGAT2Q10469 447 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 SF3B4Q15427 424 aaKnown RBP eCLIP23.22■■□□□ 1.312e-10■■■□□ 18
VEGFA-208ENST00000417285 RIPPLY2Q5TAB7 128 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 RILPQ96NA2 401 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 BRINP2Q9C0B6 783 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 Q9UFV3 132 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 KCNN3Q9UGI6 736 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 BCAP29Q9UHQ4 241 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 ZNF639Q9UID6 485 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 MCM8Q9UJA3 840 aa23.22■■□□□ 1.31
VEGFA-208ENST00000417285 INTS1Q8N201 2190 aaKnown RBP23.21■■□□□ 1.31
VEGFA-208ENST00000417285 ANKRD17O75179 2603 aaKnown RBP23.21■■□□□ 1.31
VEGFA-208ENST00000417285 A0A1W2PPM1 405 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 TRAPPC6AO75865 159 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 LRATO95237 230 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 MYL2P10916 166 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 ABCD3P28288 659 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 CASP3P42574 277 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 ALDH9A1P49189 494 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 NAA20P61599 178 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 DCAF7P61962 342 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 SLC25A35Q3KQZ1 300 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 FAM219BQ5XKK7 198 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 NUP54Q7Z3B4 507 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 ULK2Q8IYT8 1036 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 KLHL29Q96CT2 875 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 HSPBAP1Q96EW2 488 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 SLC6A15Q9H2J7 730 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 L2HGDHQ9H9P8 463 aa23.21■■□□□ 1.31
VEGFA-208ENST00000417285 SPG11Q96JI7 2443 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 ACOX3O15254 700 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 PPM1BO75688 479 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 ESRRBO95718 433 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 SHBGP04278 402 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 HPNP05981 417 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 ABCB1P08183 1280 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-208ENST00000417285 DRD2P14416 443 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 MASP1P48740 699 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 TRPC1P48995 793 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 KRTAP10-9P60411 292 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 DUSP8Q13202 625 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 CCDC153Q494R4 210 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 SPIN4Q56A73 249 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 FAM111BQ6SJ93 734 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 ZYG11AQ6WRX3 759 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 TDRPQ86YL5 185 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 SAMD14Q8IZD0 417 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms