RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MFHAS1Q9Y4C4 1052 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PCDHGB1Q9Y5G3 927 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SRPRBQ9Y5M8 271 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 REV3LO60673 3130 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 LAMA2P24043 3122 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 RANBP2P49792 3224 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 NEDD4P46934 1319 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 MAP1BP46821 2468 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 A0A087WZY1 265 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 KIR2DS5A0A0G2JLQ3 304 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NCF1BA6NI72 391 aaPredicted RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 OR52A4PA6NMU1 304 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 C4orf47A7E2U8 309 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NCF1CA8MVU1 366 aaPredicted RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 RSPH10B2B2RC85 870 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 F8VVB4 439 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 F8VWA3 439 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 H7C1Q1 480 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 KIR2DS3K7RE56 304 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ZNF197O14709 1029 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 MED7O43513 233 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 JAK2O60674 1132 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 WDR1O75083 606 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 OR6A2O95222 327 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 OXTP01178 125 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 C9P02748 559 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 RSPH10BP0C881 870 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 CPN1P15169 458 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NCK1P16333 377 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SRD5A2P31213 254 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ID1P41134 155 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NSFP46459 744 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 AP3M2P53677 418 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PLTPP55058 493 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 BRWD1-AS2P59051 145 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 DYNLL1P63167 89 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 CX3CL1P78423 397 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SCGB2A2Q13296 93 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 HTR4Q13639 388 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 RBBP7Q16576 425 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 CFAP157Q5JU67 520 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NADSYN1Q6IA69 706 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 SCARA5Q6ZMJ2 495 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ZC3H3Q8IXZ2 948 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 ESR2Q92731 530 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 MCHR2Q969V1 340 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 ULK4Q96C45 1275 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 BPIFA2Q96DR5 249 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 NDNQ99608 321 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 COQ7Q99807 217 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 RIOK1Q9BRS2 568 aaKnown RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 SSBP3Q9BWW4 388 aaPredicted RBP2.34□□□□□ -2.03
MCF2-204ENST00000414978 KLHL31Q9H511 634 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 CLMPQ9H6B4 373 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 OR6C2Q9NZP2 312 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PACSIN3Q9UKS6 424 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 PCSK5Q92824 1860 aa2.34□□□□□ -2.03
MCF2-204ENST00000414978 TRBV2A0A0J9YWF9 115 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 ESYT2A0FGR8 921 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 SERINC4A6NH21 518 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 CYR61O00622 381 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 ARPC2O15144 300 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 CLDN3O15551 220 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 DFNA5O60443 496 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 NEBLO76041 1014 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 THRBP10828 461 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 MAOAP21397 527 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 CRYBB1P53674 252 aaPredicted RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 TRAF3Q13114 568 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 DDX39BQ13838 428 aaKnown RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 PTGR1Q14914 329 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 INPP5JQ15735 1006 aaPredicted RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 MLF2Q15773 248 aaPredicted RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 PCK2Q16822 640 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 KLHL40Q2TBA0 621 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 SBK1Q52WX2 424 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 GPAT3Q53EU6 434 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 PDLIM3Q53GG5 364 aaPredicted RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 EARS2Q5JPH6 523 aaKnown RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 ARHGAP17Q68EM7 881 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 KIAA0895LQ68EN5 471 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 C11orf63Q6NUN7 778 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 SHC4Q6S5L8 630 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 GRASPQ7Z6J2 395 aaPredicted RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 PHC2Q8IXK0 858 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 SPEM1Q8N4L4 309 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 LRRC17Q8N6Y2 441 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 BBOF1Q8ND07 529 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 TRPV3Q8NET8 790 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 UBTD2Q8WUN7 234 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 ADAMTS14Q8WXS8 1223 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 RPL3LQ92901 407 aaKnown RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 RPGRIP1Q96KN7 1286 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 FAM213AQ9BRX8 229 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 CWH43Q9H720 699 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 MED20Q9H944 212 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 FARSBQ9NSD9 589 aaKnown RBP2.34□□□□□ -2.04
MCF2-204ENST00000414978 PTTG3PQ9NZH4 202 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 RAB23Q9ULC3 237 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 OR1A2Q9Y585 309 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms