RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 SMIM30A4D0T7 59 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 D6RAR5 112 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 M0QZQ0 153 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 ECI2O75521 394 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 SIX3O95343 332 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 ACSM4P0C7M7 580 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CTSAP10619 480 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 ITGAMP11215 1152 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 EPCAMP16422 314 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 MAGEA6P43360 314 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 DHPSP49366 369 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 DNAJB13P59910 316 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 KCNC4Q03721 635 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 LMAN2Q12907 356 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PDZK1IP1Q13113 114 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 ZBTB6Q15916 424 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 Q6ZVL8 140 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 FAM46DQ8NEK8 389 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PXT1Q8NFP0 134 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CD300LFQ8TDQ1 290 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 NEDD4LQ96PU5 975 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 UHRF1Q96T88 793 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 KXD1Q9BQD3 176 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CACNG2Q9Y698 323 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 URB1O60287 2271 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 KERAO60938 352 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 VNN2O95498 520 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 F7P08709 466 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 UBBP0CG47 229 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 UBCP0CG48 685 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF250P15622 560 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PTPN6P29350 595 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 GKP32189 559 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 STC1P52823 247 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 BTG1P62324 171 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 RPS27AP62979 156 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 UBA52P62987 128 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 CATSPEREQ5SY80 951 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 C22orf42Q6IC83 251 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 METAP1DQ6UB28 335 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 GSG1LQ6UXU4 331 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 SMIM15Q7Z3B0 74 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PEG10Q86TG7 708 aaKnown RBP8.12□□□□□ -1.11
PBRM1-209ENST00000412587 TMEM151AQ8N4L1 468 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 C11orf65Q8NCR3 313 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 PTP4A1Q93096 173 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 RFKQ969G6 155 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 GPR22Q99680 433 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 TMEM45AQ9NWC5 275 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 KLK4Q9Y5K2 254 aa8.12□□□□□ -1.11
PBRM1-209ENST00000412587 WASH4PA8MWX3 477 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 PHYHO14832 338 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 TCAPO15273 167 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 INHBBP09529 407 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 SERPINF1P36955 418 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 MAP2K6P52564 334 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
PBRM1-209ENST00000412587 RAP2BP61225 183 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 MARCH8Q5T0T0 291 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 SLC6A19Q695T7 634 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 SLC30A6Q6NXT4 461 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF852Q6ZMS4 543 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 B3GNT8Q7Z7M8 397 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 ANKRD46Q86W74 232 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF248Q8NDW4 579 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 OR10K1Q8NGX5 313 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
PBRM1-209ENST00000412587 P2RY13Q9BPV8 354 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 MGME1Q9BQP7 344 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 SLCO3A1Q9UIG8 710 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 OSGIN1Q9UJX0 560 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 MAP4K5Q9Y4K4 846 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 PCDHB14Q9Y5E9 798 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 A8MT66 165 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 B4DXG7 233 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 TLR4O00206 839 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 TGM5O43548 720 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 LAMP2P13473 410 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 PAX6P26367 422 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 CST5P28325 142 aaPredicted RBP8.11□□□□□ -1.11
PBRM1-209ENST00000412587 TAS2R41P59536 307 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 NKX3-2P78367 333 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 SCAPQ12770 1279 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 MAD2L1BPQ15013 274 aaPredicted RBP8.11□□□□□ -1.11
PBRM1-209ENST00000412587 GCNT6Q5T4J0 391 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 HACD4Q5VWC8 232 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 LIPKQ5VXJ0 399 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 CD276Q5ZPR3 534 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 NAA40Q86UY6 237 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 FRS2Q8WU20 508 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 TFGQ92734 400 aaPredicted RBP8.11□□□□□ -1.11
PBRM1-209ENST00000412587 SMARCD2Q92925 531 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 PKMYT1Q99640 499 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 NWD2Q9ULI1 1742 aa8.11□□□□□ -1.11
PBRM1-209ENST00000412587 HEPACAM2A8MVW5 462 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms