RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 GALNT8Q9NY28 637 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FETUBQ9UGM5 382 aa12.99□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SH3D21A4FU49 640 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 C2orf72A6NCS6 295 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CASKO14936 926 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CDH16O75309 829 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ABCB1P08183 1280 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MTHFD2P13995 350 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CPN1P15169 458 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ABCD3P28288 659 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CRABP2P29373 138 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GCKP35557 465 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 XKP51811 444 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MRPS25P82663 173 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SRYQ05066 204 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 C6orf163Q5TEZ5 329 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DESI1Q6ICB0 168 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PPM1NQ8N819 430 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 OR4K14Q8NGD5 310 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SLC44A1Q8WWI5 657 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ISL2Q96A47 359 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 INTS12Q96CB8 462 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TM9SF2Q99805 663 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TUBA1CQ9BQE3 449 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NXF5Q9H1B4 397 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RNF11Q9Y3C5 154 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DNHD1Q96M86 4753 aa12.98□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MED12LQ86YW9 2145 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 LRRC14BA6NHZ5 514 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SYCE1LA8MT33 242 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 H0Y3Z8 333 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 EIF3HO15372 352 aaKnown RBP eCLIP12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ARHGEF9O43307 516 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ICOSLGO75144 302 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PPM1BO75688 479 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RCBTB2O95199 551 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 HEXAP06865 529 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GFAPP14136 432 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NAGAP17050 411 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NT5EP21589 574 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GPX3P22352 226 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PIK3CGP48736 1102 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GPX6P59796 221 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CALCOCO2Q13137 446 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PFKFB4Q16877 469 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SLC30A6Q6NXT4 461 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PLXDC2Q6UX71 529 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NUP54Q7Z3B4 507 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CXorf67Q86X51 503 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 VWA5B2Q8N398 1253 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 C17orf47Q8NEP4 570 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 OR7G1Q8NGA0 311 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 WDR20Q8TBZ3 569 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 KCTD4Q8WVF5 259 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SMPDL3BQ92485 455 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ARSGQ96EG1 525 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SFXN3Q9BWM7 321 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 IPPKQ9H8X2 491 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SERHLQ9NQF3 203 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MAPRE3Q9UPY8 281 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 EIF3LQ9Y262 564 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DTX4Q9Y2E6 619 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ACOT9Q9Y305 439 aa12.97□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FAM171A2A8MVW0 826 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FOXE1O00358 373 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SNPHO15079 494 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 UGDHO60701 494 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 LY6G6DO95868 133 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GSTA2P09210 222 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CPMP14384 443 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 S1PR1P21453 382 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PAFAH1B1P43034 410 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 IRF9Q00978 393 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GTF2H2Q13888 395 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NNATQ16517 81 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ENPP6Q6UWR7 440 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GOLGA7Q7Z5G4 137 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 P3H2Q8IVL5 708 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TRIM42Q8IWZ5 723 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GCNT2Q8N0V5 402 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 L3MBTL4Q8NA19 623 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 OR14L1PQ8NHC6 308 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RHEBL1Q8TAI7 183 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RDH11Q8TC12 318 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 WNT2BQ93097 391 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 HGDQ93099 445 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ZFP3Q96NJ6 502 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NODALQ96S42 347 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SERPINI1Q99574 410 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GALNT9Q9HCQ5 603 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 KLRF1Q9NZS2 232 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 WHRNQ9P202 907 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NDRG3Q9UGV2 375 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 BCAP29Q9UHQ4 241 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms