RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 RPS8P62241 208 aaKnown RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 SP3Q02447 781 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 SRSF5Q13243 272 aaKnown RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 ZNF74Q16587 644 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 ZNF528Q3MIS6 628 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 DCAF4L1Q3SXM0 396 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 MPPE1Q53F39 396 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 FAM72AQ5TYM5 149 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 TAF3Q5VWG9 929 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 ZNF776Q68DI1 518 aaPredicted RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 SNRNP48Q6IEG0 339 aaKnown RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 FAM72DQ6L9T8 149 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 SLC25A47Q6Q0C1 308 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 SLC24A5Q71RS6 500 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 COX8CQ7Z4L0 72 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 C5orf24Q7Z6I8 188 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 LHFPL4Q7Z7J7 247 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 SLC22A16Q86VW1 577 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 FAM72BQ86X60 149 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 CBWD2Q8IUF1 395 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 OR4L1Q8NH43 312 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 SUSD6Q92537 303 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 ZNF501Q96CX3 271 aaPredicted RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 PRICKLE1Q96MT3 831 aaPredicted RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 LPAR4Q99677 370 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 BCL7BQ9BQE9 202 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 RBM24Q9BX46 236 aaKnown RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 FAM192AQ9GZU8 254 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 FAM49AQ9H0Q0 323 aaPredicted RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 ERVK-18Q9QC07 812 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 MRTO4Q9UKD2 239 aaKnown RBP4.48□□□□□ -1.69
LSM5-206ENST00000409987 PILRAQ9UKJ1 303 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 PRDM4Q9UKN5 801 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 TRAF3IP3Q9Y228 551 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 ETV7Q9Y603 341 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 GRIN2AQ12879 1464 aa4.48□□□□□ -1.69
LSM5-206ENST00000409987 IGHV4-4A0A075B6R2 117 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 A0A087WUV0 522 aaPredicted RBP4.47□□□□□ -1.69
LSM5-206ENST00000409987 ASB14A6NK59 587 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 WASH3PC4AMC7 463 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 E9PMD0 336 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 SGK494L7N484 410 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 ZNF264O43296 627 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 LRRTM2O43300 516 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 KHDRBS3O75525 346 aaKnown RBP4.47□□□□□ -1.69
LSM5-206ENST00000409987 WBP4O75554 376 aaKnown RBP4.47□□□□□ -1.69
LSM5-206ENST00000409987 CTAG2O75638 210 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 NDUFA7O95182 113 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 SEC24AO95486 1093 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 TXNDC12O95881 172 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 RHOXF2BP0C7M4 288 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 EZRP15311 586 aaKnown RBP4.47□□□□□ -1.69
LSM5-206ENST00000409987 HNF1AP20823 631 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 RBMS1P29558 406 aaKnown RBP4.47□□□□□ -1.69
LSM5-206ENST00000409987 GRIA1P42261 906 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 OR1D5P58170 312 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 HAND2P61296 217 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 SSX2Q16385 188 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 ZSWIM7Q19AV6 140 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 FFAR4Q5NUL3 377 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 LIPJQ5W064 366 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 CLEC2AQ6UVW9 174 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 LEKR1Q6ZMV7 388 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 CENPUQ71F23 418 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 VPS36Q86VN1 386 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 GPC2Q8N158 579 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 LRRC75A-AS1Q8N1F1 130 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 UBE2J2Q8N2K1 259 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 LRRC43Q8N309 656 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 CNBD1Q8NA66 436 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 TMEM178AQ8NBL3 297 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 RAB3IL1Q8TBN0 382 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 RAET1EQ8TD07 263 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 P3H4Q92791 437 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 PEX13Q92968 403 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 CASD1Q96PB1 797 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 RBM14Q96PK6 669 aaKnown RBP4.47□□□□□ -1.69
LSM5-206ENST00000409987 RHOXF2Q9BQY4 288 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 NDUFAF3Q9BU61 184 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 LRRCC1Q9C099 1032 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 PNNQ9H307 717 aaKnown RBP4.47□□□□□ -1.69
LSM5-206ENST00000409987 MED20Q9H944 212 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 MAN2C1Q9NTJ4 1040 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.47□□□□□ -1.69
LSM5-206ENST00000409987 AGPAT5Q9NUQ2 364 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 EXOC1Q9NV70 894 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 THEGQ9P2T0 379 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 LHX3Q9UBR4 397 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 EPHA6Q9UF33 1036 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 PILRBQ9UKJ0 227 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 TCF19Q9Y242 345 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 GLI2P10070 1586 aa4.47□□□□□ -1.69
LSM5-206ENST00000409987 KANK1Q14678 1352 aa4.46□□□□□ -1.7
LSM5-206ENST00000409987 PARD3Q8TEW0 1356 aa4.46□□□□□ -1.7
LSM5-206ENST00000409987 TRBV4-1A0A0J9YWV2 114 aa4.46□□□□□ -1.7
LSM5-206ENST00000409987 PCP4L1A6NKN8 68 aa4.46□□□□□ -1.7
LSM5-206ENST00000409987 NPIPA2E9PIF3 369 aa4.46□□□□□ -1.7
LSM5-206ENST00000409987 TM7SF2O76062 418 aa4.46□□□□□ -1.7
LSM5-206ENST00000409987 GOT2P00505 430 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms