RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OAZ3Q9UMX2 235 aa8.03□□□□□ -1.12
SCN9A-203ENST00000409672 LRRN3E7EW58 273 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 MANBAO00462 879 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 RNH1P13489 461 aaKnown RBP8.02□□□□□ -1.12
SCN9A-203ENST00000409672 HTR7P34969 479 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 EMP2P54851 167 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 C6orf141Q5SZD1 244 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 PLCXD3Q63HM9 321 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 OR4C11Q6IEV9 310 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 OR4K13Q8NH42 304 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 PGM2Q96G03 612 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 MND1Q9BWT6 205 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 NARFLQ9H6Q4 476 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 EURLQ9NYK6 297 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF225Q9UK10 706 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 SORCS3Q9UPU3 1222 aa8.02□□□□□ -1.12
SCN9A-203ENST00000409672 FSCN2O14926 492 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF821O75541 412 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 CRTAPO75718 401 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 H6PDO95479 791 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 IGHV3-9P01782 118 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 NR2C1P13056 603 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 GSTM2P28161 218 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 PRKAR1BP31321 381 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 RNF220Q5VTB9 566 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 MCATQ8IVS2 390 aaKnown RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 SMOQ99835 787 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF160Q9HCG1 818 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ACOX3O15254 700 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 SCELO95171 688 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 CHMP24386 653 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 RBM34P42696 430 aaKnown RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ERVK-16P61578 105 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF584Q8IVC4 421 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 NPAS3Q8IXF0 933 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 HIPK2Q9H2X6 1198 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 RXFP3Q9NSD7 469 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 GNG13Q9P2W3 67 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 NAALAD2Q9Y3Q0 740 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 A0A0A6YYC8 382 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 GJE1A6NN92 205 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 I3L1I5 382 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 TUSC2O75896 110 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ADRB3P13945 408 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 C5AR1P21730 350 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ACRV1P26436 265 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 CTXN1P60606 82 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 EFR3AQ14156 821 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 CYBRD1Q53TN4 286 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 OR5K1Q8NHB7 308 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 MTMR10Q9NXD2 777 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF451Q9Y4E5 1061 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 HMGN1P05114 100 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 EIF4EP06730 217 aaKnown RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 CBSLP0DN79 551 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 CREB1P16220 341 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 CBSP35520 551 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 DYRK1AQ13627 763 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 SLITRK4Q8IW52 837 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF687Q8N1G0 1237 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 TRAM1L1Q8N609 369 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 OR56A3Q8NH54 315 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 TCEAL4Q96EI5 215 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 RAD52P43351 418 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 TGFBIQ15582 683 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 LIPKQ5VXJ0 399 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 LMNTD1Q8N9Z9 388 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 MAFIPQ8WZ33 124 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 MAL2Q969L2 176 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 NLE1Q9NVX2 485 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 XRN1Q8IZH2 1706 aaKnown RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 MATN2O00339 956 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ANXA3P12429 323 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 MSR1P21757 451 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 HNRNPA2B1P22626 353 aaKnown RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 RPS15AP62244 130 aaKnown RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 STON2Q8WXE9 905 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 TOMM40LQ969M1 308 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 NECTIN4Q96NY8 510 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ELF4Q99607 663 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 SMOC2Q9H3U7 446 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 RANBP3Q9H6Z4 567 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 PAK6Q9NQU5 681 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 PCDHGA2Q9Y5H1 932 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 USP32Q8NFA0 1604 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 H7C2Y5 167 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 RDH16O75452 317 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 PIGFQ07326 219 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF763Q0D2J5 394 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 DCAF12L1Q5VU92 463 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 LARP4Q71RC2 724 aaKnown RBP eCLIP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 LILRB2Q8N423 598 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 OR5M1Q8NGP8 315 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 TMBIM1Q969X1 311 aa8.02□□□□□ -1.13
SCN9A-203ENST00000409672 DPH2Q9BQC3 489 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 AJAP1Q9UKB5 411 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-203ENST00000409672 MCTS1Q9ULC4 181 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms