RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 OR10H4Q8NGA5 316 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 SLC38A5Q8WUX1 472 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 TREX2Q9BQ50 279 aaPredicted RBP13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ZFR2Q9UPR6 939 aaKnown RBP13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ANKRD33BA6NCL7 494 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 KIAA0040Q15053 153 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF750Q32MQ0 723 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF385BQ569K4 471 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 TMEM236Q5W0B7 351 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 Q6ZS52 159 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 PLXDC1Q8IUK5 500 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 TBX5Q99593 518 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 KLHL31Q9H511 634 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 CFL2Q9Y281 166 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 DOCK6Q96HP0 2047 aa13.26□□□□□ -0.29
SCAF4-202ENST00000399804 MAGEB3O15480 346 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 LAMTOR5O43504 91 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 FUT4P22083 530 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 BMP8BP34820 402 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 MLLT10P55197 1068 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 PHC1P78364 1004 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 RGS21Q2M5E4 152 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 TBC1D25Q3MII6 688 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 BMP8AQ7Z5Y6 402 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 SPRED1Q7Z699 444 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 OR9A4Q8NGU2 314 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 BORCS5Q969J3 196 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 SH3YL1Q96HL8 342 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 MTHFD2LQ9H903 347 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 NMNAT1Q9HAN9 279 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 SH2B3Q9UQQ2 575 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 SCDO00767 359 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 CASKO14936 926 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 RPLP0P05388 317 aaKnown RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 CCDC159P0C7I6 412 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 MICAQ29983 383 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 ALG11Q2TAA5 492 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 C1orf189Q5VU69 101 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 NIPAL1Q6NVV3 410 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF544Q6NX49 715 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 ZC3H14Q6PJT7 736 aaKnown RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 OR2A1Q8NGT9 310 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 C9orf43Q8TAL5 461 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 ISOC1Q96CN7 298 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 C16orf58Q96GQ5 468 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 DEPDC7Q96QD5 511 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 GLIPR2Q9H4G4 154 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 TRPV4Q9HBA0 871 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 HS3ST3A1Q9Y663 406 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 MCIDASD6RGH6 385 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 PGRMC2O15173 223 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 TMPRSS11DO60235 418 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 FOXD2O60548 495 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 INMTO95050 263 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 APOL3O95236 402 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF182P17025 639 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 BNC1Q01954 994 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 HTR4Q13639 388 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 NHSL2Q5HYW2 709 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 SLC29A4Q7RTT9 530 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 RASGRP3Q8IV61 690 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF527Q8NB42 609 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 C19orf18Q8NEA5 215 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 S100ZQ8WXG8 99 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 HSPBAP1Q96EW2 488 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 C5orf34Q96MH7 638 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 MS4A4EQ96PG1 132 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 ICKQ9UPZ9 632 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-202ENST00000399804 MIA3Q5JRA6 1907 aa13.25□□□□□ -0.29
SCAF4-202ENST00000399804 FAM221BA6H8Z2 402 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 J3KTA2 159 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ACPPP15309 386 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 HOXC5Q00444 222 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 CDK5R2Q13319 367 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 XKR5Q6UX68 686 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 CHMP1BQ7LBR1 199 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 LUZP2Q86TE4 346 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 RBM12BQ8IXT5 1001 aaKnown RBP13.24□□□□□ -0.29
SCAF4-202ENST00000399804 OR5M3Q8NGP4 307 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 TMEM203Q969S6 136 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 NLGN3Q9NZ94 848 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ADAM30Q9UKF2 790 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 SCN5AQ14524 2016 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 SLC30A4O14863 429 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 KHNYNO15037 678 aaKnown RBP13.24□□□□□ -0.29
SCAF4-202ENST00000399804 RCBTB2O95199 551 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 AHCYP23526 432 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 KRR1Q13601 381 aaKnown RBP13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF846Q147U1 533 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 POMGNT2Q8NAT1 580 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 OR51A7Q8NH64 312 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 COQ8BQ96D53 544 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ALOXE3Q9BYJ1 711 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 TBC1D17Q9HA65 648 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 PRODH2Q9UF12 536 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 AP1M2Q9Y6Q5 423 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 PPM1DO15297 605 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 TFAP2AP05549 437 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms