RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 RHOP08100 348 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 CAPZA2P47755 286 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 SELENOWP63302 87 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 NDUFA9Q16795 377 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 SPIN4Q56A73 249 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 IER5LQ5T953 404 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 SLC27A4Q6P1M0 643 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 TMEM17Q86X19 198 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 GALNT13Q8IUC8 556 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 C12orf76Q8N812 135 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 RHBDF1Q96CC6 855 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 ZNF285Q96NJ3 590 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 C17orf62Q9BQA9 187 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 NDC1Q9BTX1 674 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 SPHK2Q9NRA0 654 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 HCFC1R1Q9NWW0 138 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 PRMT3O60678 531 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 TP53P04637 393 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 RB1P06400 928 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 CLEC2LP0C7M8 214 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 HOXC13P31276 330 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 SPINT3P49223 89 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 WNT4P56705 351 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 FAM209AQ5JX71 171 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 CTSL3PQ5NE16 218 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 TMED4Q7Z7H5 227 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 RNF175Q8N4F7 328 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 OR4C6Q8NH72 309 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 PXYLP1Q8TE99 480 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 GLYATL1Q969I3 302 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 ATP13A2Q9NQ11 1180 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 ENPP4Q9Y6X5 453 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 FMO6PO60774 539 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 EPHA2P29317 976 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 PRMT2P55345 433 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 LRRC37A5PQ49AS3 106 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 RSPO2Q6UXX9 243 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 CBLL1Q75N03 491 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 CEACAM19Q7Z692 300 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 KRT77Q7Z794 578 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 TMEM179BQ7Z7N9 219 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 HDDC3Q8N4P3 179 aa13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 THAP7Q9BT49 309 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-202ENST00000399022 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 OR10H2O60403 315 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 APODP05090 189 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 TRAPPC2P0DI81 140 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 TRAPPC2BP0DI82 140 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 SDC1P18827 310 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 MTNR1AP48039 350 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 RPS26P62854 115 aaKnown RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 ERVK-25P63136 954 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 GPLD1P80108 840 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 IFITM3Q01628 133 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 RAB33AQ14088 237 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 UGT3A2Q3SY77 523 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 MTFR2Q6P444 385 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 C3P1Q6ZMU1 363 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 IDO2Q6ZQW0 420 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 SLC30A8Q8IWU4 369 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 TANKQ92844 425 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 ZBED6CLQ96FA7 236 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 SLC28A3Q9HAS3 691 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 CNOT2Q9NZN8 540 aaKnown RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 A0A1B0GVI7 797 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 ARL6IP5O75915 188 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 OR6A2O95222 327 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 IL1AP01583 271 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 ALPPL2P10696 532 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 RAB3BP20337 219 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 GZMKP49863 264 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 RGS1Q08116 209 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 RBBP4Q09028 425 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 MGAT3Q09327 533 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 LRRC32Q14392 662 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 MANEALQ5VSG8 457 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 PRPF38BQ5VTL8 546 aaKnown RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 SERPINA11Q86U17 422 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 TEX26Q8N6G2 289 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.88□□□□□ -0.194e-6■■□□□ 11.9
RPRD1A-202ENST00000399022 KLF16Q9BXK1 252 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 OR6C2Q9NZP2 312 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 KCNK6Q9Y257 313 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 GLOD5A6NK44 160 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 C1QBP02746 253 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 TFP02787 698 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 OSMP13725 252 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 ZNF10P21506 573 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 PYCR3Q53H96 274 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 PLEKHS1Q5SXH7 462 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 RIMKLAQ8IXN7 391 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 ZNF514Q96K75 400 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 CPPED1Q9BRF8 314 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 ACTR6Q9GZN1 396 aa13.88□□□□□ -0.19
RPRD1A-202ENST00000399022 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.88□□□□□ -0.193e-7■■□□□ 11.9
RPRD1A-202ENST00000399022 PRKYO43930 277 aa13.87□□□□□ -0.19
RPRD1A-202ENST00000399022 B4GALT3O60512 393 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms