RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 LMO2P25791 158 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 PRDX2P32119 198 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 TRIM23P36406 574 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ETV5P41161 510 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 NDUFV3P56181 108 aaKnown RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 SLC26A5P58743 744 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 GMFBP60983 142 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 NME3Q13232 169 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 SCGB2A2Q13296 93 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 KARSQ15046 597 aaKnown RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 SIX1Q15475 284 aaPredicted RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 CEBPEQ15744 281 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 CARTPTQ16568 116 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 LPAL2Q16609 132 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 PCK2Q16822 640 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ECSCRQ19T08 205 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ANKRD55Q3KP44 614 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 VWA2Q5GFL6 755 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 IRGCQ6NXR0 463 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 LEG1Q6P5S2 330 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 TMEM26Q6ZUK4 368 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 STXBP4Q6ZWJ1 553 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 MOB2Q70IA6 237 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 RNF130Q86XS8 419 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 CCDC71Q8IV32 467 aaPredicted RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 ZNF440Q8IYI8 595 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 Q8N377 158 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 BANPQ8N9N5 519 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 CSNK1G2-AS1Q8NCQ2 148 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ICA1LQ8NDH6 482 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 OR52B4Q8NGK2 314 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 MIPOL1Q8TD10 442 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 AGAP3Q96P47 875 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 DEFB118Q96PH6 123 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ATOH8Q96SQ7 321 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 GPA33Q99795 319 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 HSD17B14Q9BPX1 270 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 CABLES2Q9BTV7 478 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 CCDC28BQ9BUN5 200 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 LRRC61Q9BV99 259 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 NLNQ9BYT8 704 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 STRADBQ9C0K7 418 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 PANK3Q9H999 370 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 NGBQ9NPG2 151 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ZNF446Q9NWS9 450 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 NUDT4Q9NZJ9 180 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 ATXN10Q9UBB4 475 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 CLIP2Q9UDT6 1046 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 MLXQ9UH92 298 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 BCAP29Q9UHQ4 241 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 PURGQ9UJV8 347 aaKnown RBP2.21□□□□□ -2.06
CD47-203ENST00000398258 EMCNQ9ULC0 261 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.21□□□□□ -2.06
CD47-203ENST00000398258 U3KQV3 271 aa2.21□□□□□ -2.06
CD47-203ENST00000398258 AFF2P51816 1311 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 TRGV8A0A0C4DH27 118 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 FBLL1A6NHQ2 334 aaKnown RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 TMCO5BA8MYB1 307 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 K7EPI3 171 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 PDXKO00764 312 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 CHADO15335 359 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 CLDN3O15551 220 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ZNF749O43361 778 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ECDO95905 644 aaPredicted RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 CALCAP01258 141 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 KRT6BP04259 564 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 IGFBP5P24593 272 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 TMOD1P28289 359 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ID1P41134 155 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ACAA2P42765 397 aaKnown RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 KRT6CP48668 564 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 GSK3BP49841 420 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 RIDAP52758 137 aaKnown RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 PAX8Q06710 450 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 EMC2Q15006 297 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 CD226Q15762 336 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 C17orf58Q2M2W7 97 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 PARP6Q2NL67 630 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 UNC50Q53HI1 259 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 C9orf66Q5T8R8 295 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 AGAP7PQ5VUJ5 663 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 TAF3Q5VWG9 929 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 LIPKQ5VXJ0 399 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 DOK6Q6PKX4 331 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ARSKQ6UWY0 536 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 STOX1Q6ZVD7 989 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 C4orf32Q8N8J7 132 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ZNF491Q8N8L2 437 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 MLKLQ8NB16 471 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 RELL2Q8NC24 303 aaPredicted RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 C17orf47Q8NEP4 570 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 NFAM1Q8NET5 270 aaPredicted RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 BEST4Q8NFU0 473 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 WDR36Q8NI36 951 aaKnown RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 DLX4Q92988 240 aaPredicted RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 TBC1D31Q96DN5 1066 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ANKRD27Q96NW4 1050 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 TSGA13Q96PP4 275 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 TTYH2Q9BSA4 534 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 RBM24Q9BX46 236 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms