RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ELK3P41970 407 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ARFIP1P53367 373 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 GFRA1P56159 465 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 FUT7Q11130 342 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 FRG1Q14331 258 aaKnown RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 KBTBD12Q3ZCT8 623 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ZNF662Q6ZS27 426 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 IFNEQ86WN2 208 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 GPSM1Q86YR5 675 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ZNF615Q8N8J6 731 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 PDPRQ8NCN5 879 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 OR7G3Q8NG95 312 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 TMEM171Q8WVE6 324 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 TMEM158Q8WZ71 300 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 STARD4Q96DR4 205 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 PIGQQ9BRB3 760 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 OSBPL11Q9BXB4 747 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 OR10A5Q9H207 317 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ACTR8Q9H981 624 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ZNF701Q9NV72 531 aaPredicted RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 LYARQ9NX58 379 aaKnown RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 ELOVL5Q9NYP7 299 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 ADGRE2Q9UHX3 823 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 PTBP2Q9UKA9 531 aaKnown RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 EXO1Q9UQ84 846 aaKnown RBP13.57□□□□□ -0.24
SEC13-206ENST00000397102 DLGAP4Q9Y2H0 992 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 WIF1Q9Y5W5 379 aa13.57□□□□□ -0.24
SEC13-206ENST00000397102 GLOD5A6NK44 160 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 WASHC1A8K0Z3 465 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 ICOSLGO75144 302 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 PPM1BO75688 479 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 CBR3O75828 277 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 SOX30O94993 753 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 WISP3O95389 354 aaPredicted RBP13.56□□□□□ -0.24
SEC13-206ENST00000397102 TGM6O95932 706 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 POU2F1P14859 743 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 UGT2B10P36537 528 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 PTGDSP41222 190 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 FNTAP49354 379 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 LHX2P50458 406 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 SNTA1Q13424 505 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 TNK1Q13470 666 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 PPP1R7Q15435 360 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 HP1BP3Q5SSJ5 553 aaPredicted RBP13.56□□□□□ -0.24
SEC13-206ENST00000397102 MRM1Q6IN84 353 aaKnown RBP13.56□□□□□ -0.24
SEC13-206ENST00000397102 VWA1Q6PCB0 445 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 ZNF474Q6S9Z5 364 aaPredicted RBP13.56□□□□□ -0.24
SEC13-206ENST00000397102 LRRC70Q7Z2Q7 622 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 GALNT12Q8IXK2 581 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 MS4A14Q96JA4 679 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 CXorf56Q9H5V9 222 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 WDR41Q9HAD4 459 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 SERHLQ9NQF3 203 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 CD274Q9NZQ7 290 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 RNF112Q9ULX5 631 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 MAPRE3Q9UPY8 281 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 ASB4Q9Y574 426 aa13.56□□□□□ -0.24
SEC13-206ENST00000397102 A0A1W2PR48 441 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 CT62P0C5K7 136 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 ZNF708P17019 499 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 GPX3P22352 226 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 STARP49675 285 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 SLC12A2P55011 1212 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 CLDN18P56856 261 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 MGAT5Q09328 741 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
SEC13-206ENST00000397102 OR4D1Q15615 310 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 OR2A2Q6IF42 318 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 AAGABQ6PD74 315 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 ZNF550Q7Z398 422 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 NUP54Q7Z3B4 507 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 P4HA3Q7Z4N8 544 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 PDIK1LQ8N165 341 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 RNF175Q8N4F7 328 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 SPATA6LQ8N4H0 392 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 CNEP1R1Q8N9A8 125 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 HUS1BQ8NHY5 278 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 RDH11Q8TC12 318 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 HGDQ93099 445 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 CAVIN3Q969G5 261 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 LRRC39Q96DD0 335 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 PGM2Q96G03 612 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 ZC3HAV1LQ96H79 300 aaKnown RBP13.55□□□□□ -0.24
SEC13-206ENST00000397102 NODALQ96S42 347 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 NAP1L3Q99457 506 aaPredicted RBP13.55□□□□□ -0.24
SEC13-206ENST00000397102 SLC39A3Q9BRY0 314 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 ZNF717Q9BY31 904 aaPredicted RBP13.55□□□□□ -0.24
SEC13-206ENST00000397102 CD244Q9BZW8 370 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 NXF5Q9H1B4 397 aaKnown RBP13.55□□□□□ -0.24
SEC13-206ENST00000397102 RHOJQ9H4E5 214 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 GALNT9Q9HCQ5 603 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 KLRF1Q9NZS2 232 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 ASIC3Q9UHC3 531 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 CR1P17927 2039 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 USF3Q68DE3 2245 aa13.55□□□□□ -0.24
SEC13-206ENST00000397102 A0A0A6YYD5 115 aa13.54□□□□□ -0.24
SEC13-206ENST00000397102 A0A1W2PS29 197 aa13.54□□□□□ -0.24
SEC13-206ENST00000397102 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
SEC13-206ENST00000397102 LRRC14BA6NHZ5 514 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms