RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 GALNT8Q9NY28 637 aa7.31□□□□□ -1.24
NUP98-206ENST00000397013 CTNNAL1Q9UBT7 734 aa7.31□□□□□ -1.24
NUP98-206ENST00000397013 BOKQ9UMX3 212 aaPredicted RBP7.31□□□□□ -1.24
NUP98-206ENST00000397013 MTO1Q9Y2Z2 717 aaKnown RBP7.31□□□□□ -1.24
NUP98-206ENST00000397013 EML6Q6ZMW3 1958 aa7.31□□□□□ -1.24
NUP98-206ENST00000397013 CSPG4Q6UVK1 2322 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 ATRQ13535 2644 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 DNAJA2O60884 412 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 HPNP05981 417 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 CT62P0C5K7 136 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 PCNAP12004 261 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 HIST1H1TP22492 207 aaPredicted RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 IVDP26440 423 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 SSTR4P31391 388 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 RPL21P46778 160 aaKnown RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 HNRNPH2P55795 449 aaKnown RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 SLC37A1P57057 533 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 IGLV3-21P80748 117 aaPredicted RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 CDKL1Q00532 357 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 SRYQ05066 204 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 FAM27E3Q08E93 113 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 EBPQ15125 230 aaKnown RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 TOMM20Q15388 145 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 TGFBIQ15582 683 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 NTRK2Q16620 822 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 CYP1B1Q16678 543 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 SHEQ5VZ18 495 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 FAM219BQ5XKK7 198 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 BEND4Q6ZU67 534 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 YTHDF3Q7Z739 585 aaKnown RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 ZC3HC1Q86WB0 502 aaKnown RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 P3H2Q8IVL5 708 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 GCNT2Q8N0V5 402 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 ZNF441Q8N8Z8 693 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 SIMC1Q8NDZ2 872 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 TTLQ8NG68 377 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 SLC22A8Q8TCC7 542 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 ABTB1Q969K4 478 aaPredicted RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 INTS12Q96CB8 462 aaKnown RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 PERPQ96FX8 193 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 RILPQ96NA2 401 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 WFIKKN1Q96NZ8 548 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 TUBA1CQ9BQE3 449 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 G6PC3Q9BUM1 346 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 MS4A8Q9BY19 250 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 RPF2Q9H7B2 306 aaKnown RBP7.3□□□□□ -1.24
NUP98-206ENST00000397013 DNAJC11Q9NVH1 559 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 COPS7AQ9UBW8 275 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 EDARQ9UNE0 448 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 PCDHGB3Q9Y5G1 929 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 NPFFR2Q9Y5X5 522 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 NCKAP5O14513 1909 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 STAB1Q9NY15 2570 aa7.3□□□□□ -1.24
NUP98-206ENST00000397013 A0A088AWK7 358 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 IQANK1A0A1B0GTG1 560 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 A0A1W2PR48 441 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 MBD3L4A6NDZ8 208 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 MBD3L3A6NE82 208 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 MBD3L5A6NJ08 208 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 CD8B2A6NJW9 211 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 C17orf51A8MQB3 221 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 DEFB108AA8MXU0 73 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 DNALI1O14645 258 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 PGRMC2O15173 223 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 PHGDHO43175 533 aaKnown RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 TMPRSS11DO60235 418 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 CCNT2O60583 730 aaKnown RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 EEDO75530 441 aaKnown RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 WISP3O95389 354 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 GBAP04062 536 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 TMIGD3P0DMS9 266 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 NEFHP12036 1026 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 ALOX15P16050 662 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 RAB6AP20340 208 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 ZNF10P21506 573 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 SERPINB3P29508 390 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 GGT5P36269 586 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 CASP3P42574 277 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 HNMTP50135 292 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 NR1H2P55055 460 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 CHIT1Q13231 466 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 DDX39BQ13838 428 aaKnown RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 FASTKD3Q14CZ7 662 aaKnown RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 FXNQ16595 210 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 AP5B1Q2VPB7 878 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 OR4C11Q6IEV9 310 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 SYDE1Q6ZW31 735 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 FRA10AC1Q70Z53 315 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 GALNT7Q86SF2 657 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 KIF18BQ86Y91 864 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 NKAPQ8N5F7 415 aaKnown RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 FAM169BQ8N8A8 192 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 BBOF1Q8ND07 529 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 MAPK1IP1LQ8NDC0 245 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 MBD3L2Q8NHZ7 208 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 PPP1R14CQ8TAE6 165 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 GABPB2Q8TAK5 448 aaPredicted RBP7.29□□□□□ -1.24
NUP98-206ENST00000397013 RDH11Q8TC12 318 aa7.29□□□□□ -1.24
NUP98-206ENST00000397013 SPPL2AQ8TCT8 520 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms