RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CCDC120Q96HB5 630 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PITHD1Q9GZP4 211 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 FOLH1BQ9HBA9 442 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GABRQQ9UN88 632 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 FEZF1A0PJY2 475 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MRPL3P09001 348 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ADH6P28332 368 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TAS2R38P59533 333 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SLC10A2Q12908 348 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SF3B4Q15427 424 aaKnown RBP eCLIP5.2□□□□□ -1.582e-10■■■■□ 19.4
VPS13C-204ENST00000395898 TMPRSS9Q7Z410 1059 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GPR150Q8NGU9 434 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 NELL2Q99435 816 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PHOX2BQ99453 314 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PITX2Q99697 317 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SLC12A9Q9BXP2 914 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SPATA6Q9NWH7 488 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TAS2R3Q9NYW6 316 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 A0A1W2PQU0 124 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 B8ZZF3 427 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 FAM72CH0Y354 149 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 E2F3O00716 465 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 STATHP02808 62 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 RETP07949 1114 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CBLP22681 906 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SNTB2Q13425 540 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 UNC50Q53HI1 259 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 OGFRL1Q5TC84 451 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 FAM72AQ5TYM5 149 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 FAM72DQ6L9T8 149 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MAMDC2Q7Z304 686 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 FAM72BQ86X60 149 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TM9SF4Q92544 642 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SCAMP4Q969E2 229 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 LRR1Q96L50 414 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF175Q9Y473 711 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 IGKV6D-21A0A0A0MT36 114 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 M0QZQ0 153 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SDHDO14521 159 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MEF2AQ02078 507 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SGCAQ16586 387 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 EIF2S3LQ2VIR3 472 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CES4AQ5XG92 561 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 C6orf89Q6UWU4 347 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SHFQ7M4L6 423 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ABHD12BQ7Z5M8 362 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CEACAM19Q7Z692 300 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 DCP2Q8IU60 420 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF611Q8N823 705 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ACVR1CQ8NER5 493 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 OR52N2Q8NGI0 321 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PLEKHO2Q8TD55 490 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GATAD2BQ8WXI9 593 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PGAM5Q96HS1 289 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MYRFLQ96LU7 910 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM68Q96MH6 324 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CNN2Q99439 309 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 LPAR4Q99677 370 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GPR174Q9BXC1 333 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 IL21RQ9HBE5 538 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ERVK-18Q9QC07 812 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 AP1M2Q9Y6Q5 423 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TIAM2Q8IVF5 1701 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 BLACEA4D250 179 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TRIM64BA6NI03 449 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 I3L521 148 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PNMTP11086 282 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 DOC2AQ14183 400 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 UGT2A3Q6UWM9 527 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF296Q8WUU4 475 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TRIM43Q96BQ3 446 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ECHDC3Q96DC8 303 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 RTP4Q96DX8 246 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 DUSP23Q9BVJ7 150 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 IRF2BPLQ9H1B7 796 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 EVA1AQ9H8M9 152 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 AIG1Q9NVV5 245 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CIB4A0PJX0 185 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 C2orf78A6NCI8 922 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PLD2O14939 933 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 HCRTO43612 131 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MAGEA8P43361 318 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CTBP2P56545 445 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MLC1Q15049 377 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 EXOC3L2Q2M3D2 409 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM205Q6UW68 189 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 PRSS48Q7RTY5 328 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TMPRSS12Q86WS5 348 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GALNT11Q8NCW6 608 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 RELTQ969Z4 430 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 FUBP1Q96AE4 644 aaKnown RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SGTBQ96EQ0 304 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GPR62Q9BZJ7 368 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 XKR8Q9H6D3 395 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ZFP57Q9NU63 452 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TBCCD1Q9NVR7 557 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 KLHL13Q9P2N7 655 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 TRAV6A0A075B6T7 132 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms